Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02234 ATGGAGGAGGGTGACTCAAACACAACAACAATGTTAGCACCTGAACACCCTATCCCCGCGGCCTACGAGGATTCATGGGCTGCACTACAATGGGTTGCATCCCATCTTAATAAAAATGGACCTGAGCCTTGGTTGAATGACAATGCTGATTTCGCAAGGGTTTACTTAGCTGGTGACAGTGCTGGAGCCAACATAGTTCATAACCTAACCATGTTTGCTGGAGACCCGGATTCGGGTCTTGGTATGGACATTATTGGAGCATGTTTGGTCCACCCGTATTTCTGGGGTTCAGTTACAATCGGGTCGGAGGCATTGAATCCGGATAGTAATGCCATTGTGGATCGGTTATGGCCGTTTGTGTGCCCATCAAGGCCGGATAATGATGACCCGTGGGTCAACCCAGTGGCAAAGGATGCACCAAGCTTGATGTGGCTGGGGTGTAGGAGGGTGCTGGTGTGTGTGGCTGAGAAGGATGTGTTGAGGGATAGAGGGTGGCTTTATTATAATGCATTGAGTAGAAGTGGGTGGATGGGGGTGCTGGAAATTGAAGATACTCAAGGGGAGGGTCATGCTTTTCATCTCTATGATCTTGCTTCCAATAAGGCCAAGGATTTGATCAAATGCATGGCTGAGTTCTTCAACAGAGACCCTCCTCCTTTAATTTGA 666 0.485 MEEGDSNTTTMLAPEHPIPAAYEDSWAALQWVASHLNKNGPEPWLNDNADFARVYLAGDSAGANIVHNLTMFAGDPDSGLGMDIIGACLVHPYFWGSVTIGSEALNPDSNAIVDRLWPFVCPSRPDNDDPWVNPVAKDAPSLMWLGCRRVLVCVAEKDVLRDRGWLYYNALSRSGWMGVLEIEDTQGEGHAFHLYDLASNKAKDLIKCMAEFFNRDPPPLI* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02234 221 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 54 66 IPR033140 -
Rops9g02234 221 PANTHER ARYLACETAMIDE DEACETYLASE 12 198 - -
Rops9g02234 221 SUPERFAMILY alpha/beta-Hydrolases 12 215 IPR029058 -
Rops9g02234 221 Gene3D alpha/beta hydrolase 11 216 IPR029058 -
Rops9g02234 221 Pfam alpha/beta hydrolase fold 12 193 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02234 Rops-Chr9 41263496 41264567 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02234 13 216 Carbohydrate Esterase AT3G48700 46.445 3.58e-58 185