Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02218 ATGGACGGTTACGATGGAACCGTGAAGCTTGGAGCCATTAACTTGAAGCATGATCGCGGCGGCGATTTGGACTCCGGTCCCGATGTTTCGGTTTCCTCGCCGATTACAAGACAAAAAGCTGCTGCTGCTAAACAATTCATTGAGAATCATTATAAGAATTATCTTCAAGGATTGCAGGATCGTAAAGACAGACGCAGAGCGTTTCAAAGGAAAGTGCAGGAATCTCAAATATCAGCTGAAGAGCAGGAGGAAATGATGAGGAATTTGGAGCGTAAAGAAACTGAATATATGAGGCTTCAGAGATGTAAAATTGGAATTGATGACTTTGAGCAATTAACAGTTATTGGTAAAGGTGCTTTTGGTGAGGTAAGGATATGTCGTGCTAAAAGTAATGGAGAGATTTTTGCGATGAAGAAATTAAAGAAGTCAGAGATGCTTAGCCGTGGACAGGTGGAACATGTACGATCTGAGAGGAACTTGCTGGCAGAGGTTGATAGCAGATGCATAGTAAAACTCCATTATTCATTCCAAGATTCGGATTTCCTATATCTCATCATGGAATATTTACCTGGTGGTGACATTATGACATTGTTAATGAGAGAAGATATTCTTTCGGAAGATGTTGCTCGCTTCTACATTGCTGAGAGCATTCTTGCTATCTCCCAAATACATCACCACAACTATGTACATAGGGATATAAAACCAGATAACCTGATACTGGATAAAAATGGCCATTTGAAGCTTTCAGACTTTGGCTTGTGTAAGCCTCTTGATGATAAGTATTCAACAATTTTATTGGAAAATGAAGATTTTGCCAGTCAAGAATCAACTAGTGAAACTTCTGCCTCCCCTTGGTTGATGCCAAAGGAACAATTACAACAGTGGAAACGAAACCGCCGAGCATTGGCATATTCAACTGTTGGAACTCTTGATTATATGGCACCTGAAGTTTTGCTCAAGAAGGGCTATGGAATAGAATGTGATTGGTGGTCTCTTGGGGCAATCATGTATGAGATGCTTATTGGGTATCCTCCATTTTGTTCTGATGATCCAAGAATGACCTGCCGTAAGATTGTTAACTGGAAAACATGCCTGAAATTCCCCGAAGAACCCAAAATATCTGCTGAAGCTAAGGATCTGATCTGTCGCTTACTATGTGATGTTGACACAAGACTAGGAACCAGAGGAGTAGAAGAAATAAAGGCTCATCCATGGTTCAAGGGTATTCAGTGGGACATGCTTTATGAATTGGAAGCTGCATATAAACCTACAGTTACTGGAGACTTGGACACACAAAACTTTGAGAAGTTTCCTGATGTAGACGGCCCTCCATCCATAACAGCAACTGTGGGACCTTGGCGAAAGATGTTGACATCCAAAGACACTAATTTCATAGGATACACTTTCAAGAAGTCAGACATCCTTAAATCGCTTGAAAATTCAGATGCAGAGATCAGAGTAAATGGATCATCAAAAGCCCCTTCCTTGATTTCCTTGTTAGGTCGGATTGATTTGCAAGATACTGTCATTTCAGAAACTGAGCAGAAGCCATAA 1554 0.4073 MDGYDGTVKLGAINLKHDRGGDLDSGPDVSVSSPITRQKAAAAKQFIENHYKNYLQGLQDRKDRRRAFQRKVQESQISAEEQEEMMRNLERKETEYMRLQRCKIGIDDFEQLTVIGKGAFGEVRICRAKSNGEIFAMKKLKKSEMLSRGQVEHVRSERNLLAEVDSRCIVKLHYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESILAISQIHHHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLDDKYSTILLENEDFASQESTSETSASPWLMPKEQLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGIECDWWSLGAIMYEMLIGYPPFCSDDPRMTCRKIVNWKTCLKFPEEPKISAEAKDLICRLLCDVDTRLGTRGVEEIKAHPWFKGIQWDMLYELEAAYKPTVTGDLDTQNFEKFPDVDGPPSITATVGPWRKMLTSKDTNFIGYTFKKSDILKSLENSDAEIRVNGSSKAPSLISLLGRIDLQDTVISETEQKP* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02218 517 ProSiteProfiles Protein kinase domain profile. 109 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g02218 517 FunFam Non-specific serine/threonine protein kinase 193 260 - -
Rops9g02218 517 FunFam Non-specific serine/threonine protein kinase 80 192 - -
Rops9g02218 517 Pfam Protein kinase C terminal domain 425 469 IPR017892 GO:0004674|GO:0005524|GO:0006468
Rops9g02218 517 PANTHER SERINE/THREONINE-PROTEIN KINASE 33 444 - -
Rops9g02218 517 Gene3D Transferase(Phosphotransferase) domain 1 193 424 - -
Rops9g02218 517 CDD MobB_NDR_LATS-like 43 104 - -
Rops9g02218 517 Gene3D Phosphorylase Kinase; domain 1 107 435 - -
Rops9g02218 517 ProSiteProfiles AGC-kinase C-terminal domain profile. 407 479 IPR000961 GO:0004674|GO:0005524|GO:0006468
Rops9g02218 517 Coils Coil 72 102 - -
Rops9g02218 517 Pfam Protein kinase domain 109 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g02218 517 ProSitePatterns Protein kinases ATP-binding region signature. 115 138 IPR017441 GO:0005524
Rops9g02218 517 FunFam Non-specific serine/threonine protein kinase 305 424 - -
Rops9g02218 517 ProSitePatterns Serine/Threonine protein kinases active-site signature. 228 240 IPR008271 GO:0004672|GO:0006468
Rops9g02218 517 CDD STKc_NDR_like 107 470 - -
Rops9g02218 517 SMART serkin_6 109 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g02218 517 SUPERFAMILY Protein kinase-like (PK-like) 84 456 IPR011009 -
Rops9g02218 517 SMART pkinase_C_6 407 471 IPR000961 GO:0004674|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02218 Rops-Chr9 40616190 40624022 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02218 1 516 AGC Kinase Gene Family AT5G09890 76.820 0.0 834
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Rops9g02218 Pkinase 1.8e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02218 K08790 - gmx:100814085 960.288