Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02199 ATGATCAAGCAATCAATTCAACCGAAATCGTTTAGTGTTGTGAGGCCTAGGGAGAAGGTGTTGGCTGAGAAAGGATTAGATTGGAAGAAGCTTGATTCAGATATTGATGCAAAGAAGATGCTAAGTAGACCTACTAGTTCTTATTCTAACAGACCTTCCAATGCTCACTCTCAACGTTCCGAGGGTTCAAAAGTTTCTATGCCCAAACCGATACCCAAAGTGAACCCCTTCGAAGATGCCAAACCTAGGGAAGTTTTGGTCATTGAGAAAAGCATGGATTGGAAGAAGATTAATGTTGAATTGGAGCATCATAGTGTTGATAGGGAAAAGATTAAAGAAATGAAGGACTTATTTGTTAATCCGAAAAGACAAGAAAGGTAA 381 0.3911 MIKQSIQPKSFSVVRPREKVLAEKGLDWKKLDSDIDAKKMLSRPTSSYSNRPSNAHSQRSEGSKVSMPKPIPKVNPFEDAKPREVLVIEKSMDWKKINVELEHHSVDREKIKEMKDLFVNPKRQER* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02199 126 MobiDBLite consensus disorder prediction 40 64 - -
Rops9g02199 126 Pfam Plant specific eukaryotic initiation factor 4B 4 115 IPR010433 GO:0003743
Rops9g02199 126 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 15 77 IPR010433 GO:0003743
Rops9g02199 126 MobiDBLite consensus disorder prediction 33 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02199 Rops-Chr9 40286607 40290728 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02199 1 117 Eukaryotic Initiation Factors Gene Family AT3G26400 56.198 1.13e-37 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02199 - - hsyr:120182651 137.887