Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02156 ATGGCTTCTAGTTCTATGGTTGGTCAAGACCCTCGAATAGCTAGAATATCCTCTGCAATCAGAATCATCCACGACTTTCCTAAGCCAGGTATTAAGTTTCCAGATGTAACCACATTGTTTCTTGATCCGAAAACTTTCAAAGATGCCATTGACGTGTTTGTGGAGAGGTACAGAGATAAAAATATTTCTATTGTGGCAGGCTTTGAAGGAAGAGCCTTCATATTTGGCTCGCCTATTGCATTAGGTATTGGAGCAAAATTCGTCCCCATAAGGAAACACAATAAATTGCCAGGGGCTGTACGACCAGGAGAACGAGCCATAGTCATAGATGACCTTATTGTCACTGGGGAAACTTTATCTTCTGCAGCTAAGCTTCTAGAACGTGCTGGGGTGCATGTGGTCGAGTGTGCTTGCGTAATTGAATCACCAGAGTTGAAGGGACGAGAAAGGCTGGGCGACAAATCGCTTTTTGTGTTAGTTAATGCATCTTGA 492 0.4329 MASSSMVGQDPRIARISSAIRIIHDFPKPGIKFPDVTTLFLDPKTFKDAIDVFVERYRDKNISIVAGFEGRAFIFGSPIALGIGAKFVPIRKHNKLPGAVRPGERAIVIDDLIVTGETLSSAAKLLERAGVHVVECACVIESPELKGRERLGDKSLFVLVNAS* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02156 163 Gene3D - 3 161 IPR029057 -
Rops9g02156 163 SUPERFAMILY PRTase-like 18 158 IPR029057 -
Rops9g02156 163 Pfam Phosphoribosyl transferase domain 99 157 IPR000836 -
Rops9g02156 163 CDD PRTases_typeI 49 159 IPR000836 -
Rops9g02156 163 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 98 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02156 Rops-Chr9 39538628 39543992 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02156 9 163 PRT Gene Family AT1G27450 61.932 4.05e-73 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02156 K00759 - gmx:100305792 223.402