Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02150 ATGAAGTTCTATGTGAGGGACATTTTGACAAGGATGGAGATTGGTGATTTGGGTATGAAGAAACAAGCCTTGTGGAACCTTCTGGAGGTTGTTTTTGAGGATGATAAGTATGTTAAAGTGGCTGTGGATGCCGGTGATGTTGTTCATTTGTTGGTAGGTTTTCTTGGTTCATTTGAGGTGAAAATCCAAGAGGAAAGTGCTAAGGTGGTTTCTGTTGTTGCAAGTTTTGATTCCTATAAAGGGGTTTTGGTTAGTGCTGGGGTTATTGCACCTTTGGTTCGGGTTTTGAATTGTGGGTGTGAGTTGGGGAAGGTTGCGACTGCAAGGTGTTTGATGAAGTTGACTGAGAATTCGGATAATGGTTGA 366 0.4208 MKFYVRDILTRMEIGDLGMKKQALWNLLEVVFEDDKYVKVAVDAGDVVHLLVGFLGSFEVKIQEESAKVVSVVASFDSYKGVLVSAGVIAPLVRVLNCGCELGKVATARCLMKLTENSDNG* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02150 121 SUPERFAMILY ARM repeat 14 119 IPR016024 -
Rops9g02150 121 Gene3D - 5 121 IPR011989 -
Rops9g02150 121 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02150 Rops-Chr9 39446685 39447050 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02150 39 120 U-box Gene Family AT3G46510 31.707 8.78e-06 41.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02150 - - psat:127100726 195.282