Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02122 ATGTCTTTCCAAGAAGAAGAAGCGGTTCGGTTTTCTTGTCCTCAGGTTCTTGAAATCATGTTCACACAAGGTGAAATAGAAGAGCTATTTTCCCTAATTAACCAACCGGTTGATCCGGCTAGCCCTGGCTCCGGTTCACAAGGTTCGAACCGGGCTGCTTACTCAACACACGAGAGAAAGCTAAGGAGAAAGCAATCGAACCGGGAATCAGCTAGAAGGTCACGTTGGAGAAAGAAGAGGCATTTGGAGAACCTCACGAACCAAGTGAACCGGTTGAAAACAGAAAACCGGGAACTATTGAACCGGCTTGGCTTGACCATTCATCACTATCATCACCTCTCCATGGAGAATGAACTTCTAAGATCCGAATCAATGACCCTTTTGGCCAAACTTTGGGATCTTAATCAAACTTTAGACACCATGGTTTTTTCACAAGCAAAGCCAAGTAGTTGTTTATAA 459 0.4423 MSFQEEEAVRFSCPQVLEIMFTQGEIEELFSLINQPVDPASPGSGSQGSNRAAYSTHERKLRRKQSNRESARRSRWRKKRHLENLTNQVNRLKTENRELLNRLGLTIHHYHHLSMENELLRSESMTLLAKLWDLNQTLDTMVFSQAKPSSCL* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02122 152 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 57 103 IPR004827 GO:0003700|GO:0006355
Rops9g02122 152 SMART brlzneu 55 119 IPR004827 GO:0003700|GO:0006355
Rops9g02122 152 MobiDBLite consensus disorder prediction 37 80 - -
Rops9g02122 152 MobiDBLite consensus disorder prediction 66 80 - -
Rops9g02122 152 Coils Coil 75 102 - -
Rops9g02122 152 Gene3D - 57 109 - -
Rops9g02122 152 CDD bZIP_plant_GBF1 60 111 IPR045314 GO:0003700|GO:0006355
Rops9g02122 152 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 62 77 IPR004827 GO:0003700|GO:0006355
Rops9g02122 152 PANTHER BZIP TRANSCRIPTION FACTOR 44 43 141 - -
Rops9g02122 152 FunFam BZIP transcription factor 57 108 - -
Rops9g02122 152 SUPERFAMILY Leucine zipper domain 59 113 IPR046347 GO:0003700|GO:0006355
Rops9g02122 152 Pfam bZIP transcription factor 59 117 IPR004827 GO:0003700|GO:0006355
Rops9g02122 152 MobiDBLite consensus disorder prediction 37 54 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02122 3 138 bZIP Transcription Factor Family AT3G49760 37.762 6.62e-22 84.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Rops9g02122 bZIP_1 7.7e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02122 - - gmx:102668006 178.333