Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02082 ATGTCGAAGGAACACGACTACGACGTCTTCGACTCCCTGAACGCTTCTCCAACTGCTTTCCACGCCGTCGACGAAGTGAAGAAACGATTGCGAGGCGAGGGTTATGAGCAACTCTCTGAGAAGCAAGTATGGGAGCTGAAAGCTGGAAACAAGGACTTCTTCACCAGGAACCACTCCACCATCGTCGCCTTTGCCCTTGGCAAAAGATATGTTGCTGGAAATGGATTCCACGTAATTGGGGCTCACACTGATAGTCCCTGTTCGAAACTGCAACCGGTGGCAAAGGTGGTTAAAGGTGGAATATTGGAGTTTCACCACCCCAACACCCCTCTGTCACCCCCAGTCTCCGTCACCCCCACAGAGTCTCTACGCCACCAGCTACTCCTCGACGGCAGCATTTCCAACGGCAAGATAGGCTCCGCCATCTTCGCCGCCGGCAACTCCTCCTCTCCTAATCTCACCCGAAAAGGTGTCACGACGCTACCCTCTCCGGAAAAGTCTCTTCCTCCGACCAGGGAAATCCTGTGTGAAACGTTGAAGAATCTCGTTGTCGTCGTTGTTGTCGTTTCTCGTCGGAGCAAGAGGAGTCTGATCTCGCCGTCGAGGAGAAGTCGTCATCGTCTTCGTGGTGCTGTTGGAGGAGGAGCTTGGGTTGGCTTGTTGCCTGATACTCAGAGGAGGCCCCATGAAAGAACAAGAATGGGCATCTGCATATCAGTTGCATCTTCAGAGATTCATGATGAGAATGTGCTAATATTTGAAACAAGCAAGGTCCTGAATGGGAATCAAAGACTTTGCTCTGTTTACTCTAAACAAGGTTCCAAAGGACTCAACCAAGATGCTGCCTCTCTTCACCAGGGTTATGGGAAGGAAGATGGAGTGTTTTGTGGTGTTTATGATGGACATGGAAGGAATGGACACGTAGTGAGCAAAATGGTGAACAGTCGTTTGTCTTCTCTCATAGTGAGCCAAAAGAATGCTCTTGAAGAGTTTAAAAAGATAGAAAATGGTCATGACTACACCCCAAAACATTTTGACACAATGGAAGATGCGTTGGCTCCAATAAATTTTCATATATGGAAAGATGCCATTCTCAGTGCTTTCAGGGGTGAAGGTCTTATCATAGCTAATCTTGGTGACTCAAGAGCAATTTTGGGGACAATCTATGATGAAAAACTCTCAGCCATTCAATTGACCACTGATTTGAAGCCTGGGTTACCTCGGGAAGCAGATAGGATAAGGAGGTGCAAGGGTTGTGTGTATGCATTAAGGGAAGAGCCACATGTGCAACGAGTGTGGGCGCCAAATAATGAGAACTCACCTGGGCTAGCCATGTCTCGAGCTTTTGGAGATTTCATGCTCAAAGACTACGGTGTCATTGCCATCCCTGACATTTGGTTTCACCCAATAACAGCAACTGACCAATTTATTGTTCTTGCAAGTGATGGGGTGTGGGATGTACTAAGTAACAATGAGGTTGCATCAGTTGTGTGGATGGTAGACACTGAAGAGGAAGCAGCAATGGCAGTAGTGGAAGCAGCCACTGCTGCATGGGAAAAGAAATATCCTTCCTCTAAGGTAGATGACTGCACTGTGGCTTGCCTCTTCCTGCAGAAGAAACCACAAAACTTTGGGCATATGAAAAGTGAAGAGTTAGGTTAA 1662 0.4759 MSKEHDYDVFDSLNASPTAFHAVDEVKKRLRGEGYEQLSEKQVWELKAGNKDFFTRNHSTIVAFALGKRYVAGNGFHVIGAHTDSPCSKLQPVAKVVKGGILEFHHPNTPLSPPVSVTPTESLRHQLLLDGSISNGKIGSAIFAAGNSSSPNLTRKGVTTLPSPEKSLPPTREILCETLKNLVVVVVVVSRRSKRSLISPSRRSRHRLRGAVGGGAWVGLLPDTQRRPHERTRMGICISVASSEIHDENVLIFETSKVLNGNQRLCSVYSKQGSKGLNQDAASLHQGYGKEDGVFCGVYDGHGRNGHVVSKMVNSRLSSLIVSQKNALEEFKKIENGHDYTPKHFDTMEDALAPINFHIWKDAILSAFRGEGLIIANLGDSRAILGTIYDEKLSAIQLTTDLKPGLPREADRIRRCKGCVYALREEPHVQRVWAPNNENSPGLAMSRAFGDFMLKDYGVIAIPDIWFHPITATDQFIVLASDGVWDVLSNNEVASVVWMVDTEEEAAMAVVEAATAAWEKKYPSSKVDDCTVACLFLQKKPQNFGHMKSEELG* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02082 553 SMART PP2C_4 255 535 IPR001932 -
Rops9g02082 553 Gene3D - 249 540 IPR036457 -
Rops9g02082 553 SUPERFAMILY Zn-dependent exopeptidases 8 87 - -
Rops9g02082 553 ProSiteProfiles PPM-type phosphatase domain profile. 265 537 IPR001932 -
Rops9g02082 553 SUPERFAMILY PP2C-like 249 538 IPR036457 -
Rops9g02082 553 CDD PP2Cc 264 498 IPR001932 -
Rops9g02082 553 Gene3D Zn peptidases 3 104 - -
Rops9g02082 553 PANTHER PROTEIN PHOSPHATASE 223 535 IPR015655 GO:0004722|GO:0006470
Rops9g02082 553 Pfam Protein phosphatase 2C 285 514 IPR001932 -
Rops9g02082 553 Pfam Aminopeptidase I zinc metalloprotease (M18) 13 99 IPR001948 GO:0004177|GO:0006508|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02082 Rops-Chr9 38188750 38202920 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02082 234 542 PP2C-type Phosphatase Gene Family AT5G26010 48.788 6.22e-87 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02082 - - gmx:100815312 448.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02082 9 38188750 38202920 Rops9g02082 9 38188750 38202920 ECH
Rops9g02082 9 38188750 38202920 Rops10g01218 10 24712852 24714437 PCT