Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02064 ATGCCCAAAATGAAGCACTTTCTTAGAAAGCTTCACATCGGTGGTGGTGGTGGCGGCACTGCCACCATCAACCCCAATCACAATACCTTGCCTTCTCATCCTCATCATTCTAACTCTCAAACCCCTTCTTCCTCCTCCTCCTCCGCGATTCCCTCTCCACCCACTCCGAACCCTGTCGTTGAAGTCCAAAACGACGACAGTGCCGTCAACACAAACGACAATGGTGTCGCGGACTTCAATCTCTTGCAGGAAGAAGAGTTTCAAGTGCAATTGGCTCTTGCAATTAGCGCTTCCGCTTCCTCTTCCGATCCCGATCCCCACCATCACCACCATCATGACGACCCCGCCGAATCGGCGCAGATCGATGCCGCTAAACAGATCAGCCTCGGTTATGCAGCTTCTCTCACCGACACTCAGGCCCTCGTTCAGTTTCAATCTCTTCGTTATTGGAACTACAATGTCATTAATTATGATGAGAAAGTGATGGATGGATTTTATGATGCTTATGGGATCACCTCAAATTTGATTGAAAGAGGAAAGATGCCATTATTGGTGGATCTGCACACTATACCTGTCTCGCGGAATGTTGATTGTGAAGTGATTTTGGTGAACCGTGTAGTTGATATTGAGCTGAATCAACTTGAGAAAAGGGCATGTACTTTGTTCAATGAGTGTTGTGTTTCTGAACTAGGACTAATTTTGAGCGGCATACTTCAGAAACTTGCTGATGTTGTTGTTAATAGAATGGGTGGACCAGTTGGTAATGCTGATAAAATCACAAAAATATGGGCTATAAGGAGTCGCGAGTTGCGAAATTCTTTAAGAACCATTGTTCTTCCTCTTGGCTCTCTTGATGTTGGACTTTCACGTCACCGAGCCCTACTTTTCAAGGTACTTGCTGATAGGATCAATATTCCCTGCATGCTGGTAAAAGGGAGCTATTACACAGGAAGTGATGATGGTGCTGTAAATTTGATTAAAGCTGATGATGGAAGTGAATACATTATTGATATGATGGGTGCTCCTGGAACTCTTATTCCTGCTGAGGTACCCAGCAATCAGCTCCAAAACTGTGGTTTTGCTGTTAGGGGTTGTGCAGAGATTGTTGGACTACCTGACCACGCAAATTTGCTGCTTGATGTTGGAACTGATTTGCCAGGAGTCTTGTTGGATCGTGGTAGAATTTCAACCGTGGGGAGGGTCCAGACAGAAGAGTTATTAGATATGGGAAATCAAACAAATCCAGAGGAGATAAATCATGCTAAAGTAAATGAAACAGGGAGATTTGAACATACAGAAGCGTATGGGTGCTCATCACATACAGAATCATCACCTACAGAAAAGATGCGCGTAAAAAATGTCTCCAAGTATGTTCTCAGTGCAGTAAAGGACCCAGAATTTGCCCAAAAACTGCACACTGTTCTATCAGAGAATGGTGCATCACCTCCTCCTGGTCTTTTTTCAGATATAAATCCCCAAGATAGGGGTCTAGATAAAGTAAATGAAAAAGCTATTGTTCGAGCTGACCCAAATAGTTTGTTATTAAGCCATGAGAAGTCTCTCATACCCTCTGAAGGGGTGGGCTCTGCCAGTGATACTAGGTTATGTCAATATACTGACTGGTTAGCTGAACAGCAAAAAGCATTGCATACAGATGGCATTGAATTTTATGATTCTTCACAGAAAGATAATACAAGGAACAGGTTTGTAACTGTTTCTGATAGAAATAATGATTTAGAGCAATCTGATCCATTAATTGTTGATTCATTTCCTATCAATACACGTAATATGTGTAAAAAAAAGTGTCTTGAGTCTTCCTTGCCCAAGGAAGCTCTTTCTTGCAAAAGGCATAATGGGGTTGACTGTTCTTGTGATGAGGATGAAAATGGTTTTAGAAATAAGGTTGGAGCTTCTTTTAATAACATTGAATTGGGGAAAGATTCAGCCATTCAAATAAATGAGACAGTCAATGGAGATTGTATCCCATACGATGGTAAAAGCAAGAAAGTTAACCCAGTACTTGGTGAAGGCACAGAATGGGAAATTCAATGGGAGGATCTTCGTATTGGTGAGCGTATTGGTATTGGTTCTTATGGAGAAGTTTACCATGCTGATTGCAATGGCACTGAAGTTGCTGTAAAGAAGTTTCTAGACCAAGATTTCTCTGGTGATGCACTAGCTCAGTTCAAATCTGAAATTGAGATCATGTTAAGGCTGCGGCATCCTAATGTTGTGCTCTTCATGGGAGCAATTACTCGTCCCCCACATTTCTCTATCTTGACAGAGTTTCTTCCAAGAGGCAGTTTATATAAGCTATTGCATCGGCCCAATCTTGTACTTGATGAGAAGAGACGGATGCGTATGGCTCTTGATGTGGCTAAGGGAATGAATTACTTGCATACCAGCCATCCTCCCGTTGTCCATCGAGATTTAAAGTCTCCAAATCTTCTTGTTGACAAGCATTGGGTTGTTAAGGTCTGTGATTTTGGTCTCTCACGTACGAAGCACCATACATTTTTGTCATCAAAGTCTTGTGCTGGAACGCCTGAGTGGATGGCACCAGAAGTCTTGAGAAATGAGCCAGCCAATGAGAAGTGTGATGTGTATAGTTTTGGTGTGATCTTATGGGAGTTAATTACCACAAGAGTCCCATGGAAAGGTTTGAACCCAATGCAGGTTGTTGGAGCTGTTGGATTCCAAAATAAACGGCTTGAAATTCCAGAAGATGTCAATCCTGTAGTAGCTCAAATAATACGCGATTGCTGGCAAACGGAGCCACACTTGCGGCCATCATTCTCGGAGCTGATGTCTCGCCTTCACCCTCTTCAACATTTGGTTGTCCTTAGAAAGGACTCAACACATTAA 2865 0.4265 MPKMKHFLRKLHIGGGGGGTATINPNHNTLPSHPHHSNSQTPSSSSSSAIPSPPTPNPVVEVQNDDSAVNTNDNGVADFNLLQEEEFQVQLALAISASASSSDPDPHHHHHHDDPAESAQIDAAKQISLGYAASLTDTQALVQFQSLRYWNYNVINYDEKVMDGFYDAYGITSNLIERGKMPLLVDLHTIPVSRNVDCEVILVNRVVDIELNQLEKRACTLFNECCVSELGLILSGILQKLADVVVNRMGGPVGNADKITKIWAIRSRELRNSLRTIVLPLGSLDVGLSRHRALLFKVLADRINIPCMLVKGSYYTGSDDGAVNLIKADDGSEYIIDMMGAPGTLIPAEVPSNQLQNCGFAVRGCAEIVGLPDHANLLLDVGTDLPGVLLDRGRISTVGRVQTEELLDMGNQTNPEEINHAKVNETGRFEHTEAYGCSSHTESSPTEKMRVKNVSKYVLSAVKDPEFAQKLHTVLSENGASPPPGLFSDINPQDRGLDKVNEKAIVRADPNSLLLSHEKSLIPSEGVGSASDTRLCQYTDWLAEQQKALHTDGIEFYDSSQKDNTRNRFVTVSDRNNDLEQSDPLIVDSFPINTRNMCKKKCLESSLPKEALSCKRHNGVDCSCDEDENGFRNKVGASFNNIELGKDSAIQINETVNGDCIPYDGKSKKVNPVLGEGTEWEIQWEDLRIGERIGIGSYGEVYHADCNGTEVAVKKFLDQDFSGDALAQFKSEIEIMLRLRHPNVVLFMGAITRPPHFSILTEFLPRGSLYKLLHRPNLVLDEKRRMRMALDVAKGMNYLHTSHPPVVHRDLKSPNLLVDKHWVVKVCDFGLSRTKHHTFLSSKSCAGTPEWMAPEVLRNEPANEKCDVYSFGVILWELITTRVPWKGLNPMQVVGAVGFQNKRLEIPEDVNPVVAQIIRDCWQTEPHLRPSFSELMSRLHPLQHLVVLRKDSTH* 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02064 954 FunFam Serine/threonine-protein kinase isoform 1 678 765 - -
Rops9g02064 954 ProSitePatterns Serine/Threonine protein kinases active-site signature. 806 818 IPR008271 GO:0004672|GO:0006468
Rops9g02064 954 ProSiteProfiles Protein kinase domain profile. 687 943 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g02064 954 MobiDBLite consensus disorder prediction 98 117 - -
Rops9g02064 954 SMART serkin_6 687 943 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g02064 954 MobiDBLite consensus disorder prediction 21 48 - -
Rops9g02064 954 MobiDBLite consensus disorder prediction 59 74 - -
Rops9g02064 954 CDD STKc_MAP3K-like 693 939 - -
Rops9g02064 954 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 111 944 - -
Rops9g02064 954 MobiDBLite consensus disorder prediction 11 74 - -
Rops9g02064 954 Pfam Protein tyrosine and serine/threonine kinase 687 939 IPR001245 GO:0004672|GO:0006468
Rops9g02064 954 Pfam Ethylene-responsive protein kinase Le-CTR1 143 346 - -
Rops9g02064 954 Gene3D Phosphorylase Kinase; domain 1 680 764 - -
Rops9g02064 954 PRINTS Tyrosine kinase catalytic domain signature 800 818 IPR001245 GO:0004672|GO:0006468
Rops9g02064 954 PRINTS Tyrosine kinase catalytic domain signature 761 774 IPR001245 GO:0004672|GO:0006468
Rops9g02064 954 PRINTS Tyrosine kinase catalytic domain signature 847 857 IPR001245 GO:0004672|GO:0006468
Rops9g02064 954 PRINTS Tyrosine kinase catalytic domain signature 866 888 IPR001245 GO:0004672|GO:0006468
Rops9g02064 954 PRINTS Tyrosine kinase catalytic domain signature 910 932 IPR001245 GO:0004672|GO:0006468
Rops9g02064 954 MobiDBLite consensus disorder prediction 103 117 - -
Rops9g02064 954 FunFam Serine/threonine-protein kinase CTR1 766 949 - -
Rops9g02064 954 SUPERFAMILY Protein kinase-like (PK-like) 676 939 IPR011009 -
Rops9g02064 954 Gene3D Transferase(Phosphotransferase) domain 1 766 948 - -
Rops9g02064 954 ProSitePatterns Protein kinases ATP-binding region signature. 693 715 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02064 Rops-Chr9 37952768 37962198 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02064 636 953 MAP Kinase Kinase Kinase AT5G11850 77.673 1.46e-173 526
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Rops9g02064 PK_Tyr_Ser-Thr 6.7e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02064 K04424 - gmx:100779137 1410.97