Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02058 ATGTTTCTAATCGAGGATCTCTTGCCACTGTTCCACCTCGACCATGCGGTTACAAAAACTCGTGTCTTTTCAGAATCGATATTGCAGTCTCTACACGAATCCATGACGAACCCGAGTTGCGAAAGCAGCGACTCAGAACTTTGCCGTGACGAGTCAACGGCATTTGTACTCAAATTCGTGGCCATGGCTTCGATTTTGGTGGTGGGGTTCGGGGGAATCGCGATTCCTCTGGTGGGGAAACAACGATGGTGGTTTTTGAGTAGCGACGGTGTTGTGTTGGCGGCGGCGAAGGCGTTTGCGGCAGGGGTGATTTTAGCGACGGGGTTCGTGCACATGCTGGAGGACGCGTGGGAGAAATTGAACGATCCTTGCATAGGGTCCCACCCGTGGTCGGATTTTCCTTTCACCGGGTTCTTGGCTATGATGTCGGCGTTATTCACTTTGCTCGTTGACTTTGTGGCAACGCAGTACTATGAAAGCAGACAGGGGATCACACGTGACGGCGATGAACGCGGGAAGGTTGTTAATGAGGAAGAGGAAGAGGAAGAGGAAGAGAAAGAGGAGTTGTTAGGGTCGGGAATCGTGGAGGCTAAGGAGGTGTTTGGGGAAGAAGAGAGCACTGGTAGAATGCATATCGTGGGGATGCATGCTCATAGTCACTCCCACACTGCCCATGGTGGCCACGCTCACTCTCACTCTGATGACGTGGAAAGTAGCGTTCGCCACGTCGTCGTTTCACAGGTATTGGAACTAGGGATTGTATCACATTCCATAATAATTGGCTTGTCTCTAGGAGTCTCACAAAGCCCTTGTACCATGAAACCCCTAATTGCAGCATTATGCTTCCATCAATTCTTTGAAGGGTTTGCACTTGGTGGCTGCATCTCTGAAGCCCAATTCAAGACCTTACCAGCAACAATAATGGCTTGTTTCTTTGCAATAACAACGCCACTTGGTGTTGCCATTGGCACTGGTATTGCTTCAATTTTTAACCCTCACAGTCCAGGAGCACTCATCACTGAAGGCATCTTGGATTCCTTTTCAGCTGGGATTTTAGTGTATATGGCTTTAGTGGACTTAATAGCTACTGATTTTCTTAGCAAGAAAATGCGTTGTAACTTTAGGTTGCAGATAGTATCTTACTGTTTGCTTTTCCTTGGGGCTGGATTAATGTCTTTGCTCGCAATTTGGGCATGA 1197 0.4829 MFLIEDLLPLFHLDHAVTKTRVFSESILQSLHESMTNPSCESSDSELCRDESTAFVLKFVAMASILVVGFGGIAIPLVGKQRWWFLSSDGVVLAAAKAFAAGVILATGFVHMLEDAWEKLNDPCIGSHPWSDFPFTGFLAMMSALFTLLVDFVATQYYESRQGITRDGDERGKVVNEEEEEEEEEKEELLGSGIVEAKEVFGEEESTGRMHIVGMHAHSHSHTAHGGHAHSHSDDVESSVRHVVVSQVLELGIVSHSIIIGLSLGVSQSPCTMKPLIAALCFHQFFEGFALGGCISEAQFKTLPATIMACFFAITTPLGVAIGTGIASIFNPHSPGALITEGILDSFSAGILVYMALVDLIATDFLSKKMRCNFRLQIVSYCLLFLGAGLMSLLAIWA* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02058 398 NCBIfam ZIP zinc/iron transport family 40 398 IPR004698 GO:0005385|GO:0016020|GO:0071577
Rops9g02058 398 PANTHER ZINC/IRON TRANSPORTER 55 392 - -
Rops9g02058 398 Pfam ZIP Zinc transporter 56 395 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Rops9g02058 398 MobiDBLite consensus disorder prediction 168 189 - -
Rops9g02058 398 MobiDBLite consensus disorder prediction 174 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02058 Rops-Chr9 37822279 37829024 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02058 31 398 Inorganic Solute Cotransporters AT1G10970 61.198 1.37e-154 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02058 K14709 - gmx:100809426 486.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02058 9 37822279 37829024 Rops10g01229 10 24821580 24823428 PCT