Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02047 ATGGAGGGAATTAGAGTGAAAGAGGAAGAAACAGTGACATGTGTAGCTGGTTCTTCATCATCATCTTCATCTTCTAGCTTTCTTCCACAACCCATGGAAGGGTTACATGAGCATAGCAATTTCTCCAGCTTCATTCGCGAGCTCAACACCTATGGATTTAGAAAAGTTGATCCTGATCGATGGGAATTTGCAAACGAAGGGTTTTTGGCAGGACAGAGGCACTTATTGAAGACCATCAAGAGAAGAAGAAATGTGTCAAGGGGTATGCAACAACAAGAAGGTGGAGCTTGTGTTGAAGTGGGAAACTATGGACTGGAAGGTGAGTTGGAGAGGTTGAAGAGGGACAAGAACTTGTTGATGGCAGAAATTGTGAAGTTGAGGCAGCAACAGCAGAACTCAAGGGACATATTGAATGCCACGGAAGCCAGATTGCAGGCCACAGAGAAGAAACAGCAACAAATGCTGACTTTCCTTGCCAAAGCACTAAGTAATCCATCTATCCTGCAACAGTTAGTGCACAAGAGCACCCAAAACAAGGAAGTGCGAAATGTTGAAATCAAAAGGAAAAGGAGATTAACTGCTAGCCCAAGTGTGGAGAACTTGCAACAAGATGATCCTTTAACAAGGGCAGTGCCTATTGAATCATTGGTGGACTATCCATGTCATGAACAGGAGTTGGCAACTATGGAGCCTGATATGGAGACTTTTCTCTCAAAAGATTATGGTAATGAATTTAGCAGTGAAATAACAGCTGGTGGGAGTGATTTTGGTTCAGGTGGGGATACAATCTTGGAGGACTTGCTCCACAAAGACTTGACTACTGGGAATCTAGAGGATGAAGTTATAATTGGTGGTTGTTCCCAAGTTGATGTGCCAGTGGAGGATTTGGTAGCAAAGCCTGATGATTGGACTGAGGAATTGCAGGACCTTGTGGATCATAGGGACCATCTTGGATCCAAATCTTAG 966 0.4369 MEGIRVKEEETVTCVAGSSSSSSSSSFLPQPMEGLHEHSNFSSFIRELNTYGFRKVDPDRWEFANEGFLAGQRHLLKTIKRRRNVSRGMQQQEGGACVEVGNYGLEGELERLKRDKNLLMAEIVKLRQQQQNSRDILNATEARLQATEKKQQQMLTFLAKALSNPSILQQLVHKSTQNKEVRNVEIKRKRRLTASPSVENLQQDDPLTRAVPIESLVDYPCHEQELATMEPDMETFLSKDYGNEFSSEITAGGSDFGSGGDTILEDLLHKDLTTGNLEDEVIIGGCSQVDVPVEDLVAKPDDWTEELQDLVDHRDHLGSKS* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02047 321 Gene3D - 5 83 IPR036388 -
Rops9g02047 321 Pfam HSF-type DNA-binding 26 82 IPR000232 GO:0003700|GO:0006355|GO:0043565
Rops9g02047 321 SUPERFAMILY "Winged helix" DNA-binding domain 34 82 IPR036390 -
Rops9g02047 321 Coils Coil 102 129 - -
Rops9g02047 321 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 37 197 IPR027725 -
Rops9g02047 321 SMART hsfneu3 6 82 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02047 Rops-Chr9 37712855 37716022 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02047 6 320 HSF AT2G26150 44.073 4.94e-81 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Rops9g02047 HSF_DNA-bind 1.8e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02047 K09419 - gmx:100778558 409.838