Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02046 ATGGAATTGGAATGGTTGTTTCCTATCCCAATTGGAATTGGAATGGTTGTCCCTTTGGTTTCAGCAATATTCACCCTTCTGGGGTTAATATTGGGTTATCTCTATGGGCCCTATTGGGGGTTAAGGAAAGTTCCAGGCCCACCATCTTTGCCTCTGGTAGGGCACCTTCCCTTGTTAGCTAAGTATGGCCCTGATGTGTTCTCAGTTCTTGCCAAGCAATATGGCCCAATCTACAGATTTCATATGGGAAGACAACCTCTAATAATCATAGCAGATGCAGAGCTCTGTAAAGAGGTAGGAATAAAAAAATTCAAAGACATTCCAAACAGAAGCATTCCCTCTCCTATTTCTGCTTCTCCTCTTCACCAAAAAGGTCTCTTCTTCACCAGGGACTCACAATGGTCTGCCATGAGAAATACCATATTGTCTGTATACCAACCATCACACTTAGCCAGCTTAGTGCCCACAATGCAATCATTTATAGAATCTGCAACACAAAATCTTGACACCTCAAAGGAAGACATAATCTTATCTAATCTTTCTCTAAGGCTAGCAACTGATGTGATTGGAGAGGCAGCATTTGGTGTCAACTTTGGCCTCTCTAAGCCTCATTCCATTTGTGAATCAATAAAGAGTGTTAACAATGTAGTGGATGAAAATGCTAGTGATGAAGTATCAGATTTCATCAATCAACACATTTACTCCACAACACAACTTAAGATGGACTTATCTGGTTCCTTCTCCATCATACTTGGTCTACTTGTGCCTATACTTCAGGAGCCATTCAGGCAGATTCTGAAGAGAATACCAGGCACCATGGATTGGAAAATAGATAGAACTAATAAAAAATTAAGTGGTCCTCTTGATGAGATTGTTAAAAAGAGAATGAAAGATAAGAACAGAACTTCAAAGAATTTCTTGTCACTTATACTGAATGCAAGAGAATCAAAGACTGTATCAGAAAATGTGTTTTCACCTGATTATGTCAGTGCTGTTACTTATGAGCACTTGCTTGCTGGATCAGCTACCACATCCTTTACATTGTCATCCATTGTTTATTTGGTTGCTGGGCATCCAGAAGTTGAGAAAAAGTTGCTTCAAGAGATTGATGGATTTGGTCCAGCTGATAAGATACCAACTGCTCAAGATCTCCATGATAGTTTTCCTTATCTTGATCAGGTGATTAAAGAGGCCATGAGGTTTTACACTGTCTCCCCATTGGTTGCAAGAGAAACATCAAATGATGTAGAGATAGGAGGTTACCTTCTTCCAAAGGGAACATGGGTATGGTTAGCGCTTGGAGTTCTAGCAAAAGATCCAAGTAACTTTGCAGAGCCAGAAAAGTTCAAACCAGAGAGGTTTGACCCAAAATGTGAAGAAATGAAACGAAGGCATCCTTATGCATTCATACCATTCGGATTAGGTCCCCGGGCATGTATTGGTCAGAAATTTTCCCTACAAGAGATCAAGCTTACTCTGATTCATTTATACCGAAATTTTGTGTTTCATCATTCACTAAACATGGAAAAACCTGTAGAACTGGAATATGGTATAGTCCTCAACTTCAAGCATGGTGTCCAGCTTAGAGTCATGAAAAGAACATAG 1605 0.3988 MELEWLFPIPIGIGMVVPLVSAIFTLLGLILGYLYGPYWGLRKVPGPPSLPLVGHLPLLAKYGPDVFSVLAKQYGPIYRFHMGRQPLIIIADAELCKEVGIKKFKDIPNRSIPSPISASPLHQKGLFFTRDSQWSAMRNTILSVYQPSHLASLVPTMQSFIESATQNLDTSKEDIILSNLSLRLATDVIGEAAFGVNFGLSKPHSICESIKSVNNVVDENASDEVSDFINQHIYSTTQLKMDLSGSFSIILGLLVPILQEPFRQILKRIPGTMDWKIDRTNKKLSGPLDEIVKKRMKDKNRTSKNFLSLILNARESKTVSENVFSPDYVSAVTYEHLLAGSATTSFTLSSIVYLVAGHPEVEKKLLQEIDGFGPADKIPTAQDLHDSFPYLDQVIKEAMRFYTVSPLVARETSNDVEIGGYLLPKGTWVWLALGVLAKDPSNFAEPEKFKPERFDPKCEEMKRRHPYAFIPFGLGPRACIGQKFSLQEIKLTLIHLYRNFVFHHSLNMEKPVELEYGIVLNFKHGVQLRVMKRT* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02046 534 FunFam Cytochrome P450 3A4 31 534 - -
Rops9g02046 534 SUPERFAMILY Cytochrome P450 38 533 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g02046 534 PANTHER THROMBOXANE-A SYNTHASE 16 533 - -
Rops9g02046 534 Pfam Cytochrome P450 45 520 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g02046 534 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 472 481 IPR017972 GO:0005506|GO:0016705
Rops9g02046 534 Gene3D Cytochrome P450 35 534 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g02046 534 PRINTS E-class P450 group I signature 432 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g02046 534 PRINTS E-class P450 group I signature 184 202 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g02046 534 PRINTS E-class P450 group I signature 348 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g02046 534 PRINTS E-class P450 group I signature 71 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g02046 534 PRINTS E-class P450 group I signature 328 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g02046 534 PRINTS E-class P450 group I signature 392 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g02046 534 PRINTS E-class P450 group I signature 469 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g02046 534 PRINTS E-class P450 group I signature 479 502 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g02046 534 PRINTS P450 superfamily signature 339 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g02046 534 PRINTS P450 superfamily signature 393 404 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g02046 534 PRINTS P450 superfamily signature 470 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g02046 534 PRINTS P450 superfamily signature 479 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02046 Rops-Chr9 37695356 37699878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02046 82 533 Cytochrome P450 AT2G26170 74.009 0.0 667
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02046 K20771 - gmx:100805689 932.169
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02046 9 37695356 37699878 Rops10g01239 10 24967148 24974090 PCT