Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02045 ATGGGAGCTTCTGGAAAATGGGTGAAAGCGTTAATCGGGCTTAAGAAGCCCGACAAGGTTGAACATGTGAAGGAGGGTGGGAAGAAGAAGAAGTGGAGGTTATGGAAGAGTTTCTCAGATAAGTCTGAATCTGAAGGGTCACATTCCCCATCAGTGGTAGCAGATGCTTTCTCTGCTGCAATGGCCACTGTGGTGAGAGCTCCACCTAAGGATTTCAAACTCGTAAGGCAAGAATGGGCTGCTACCAGAATCCAAACTGCTTTCCGCGCCTTCTTGGCACGAAGGGCATTAAGGGCATTGAAGGGAGTGGTGAGGCTACAAGCTCTTGTAAGGGGTAGACTGGTGAGGAAGCAGGCTGCTGTGACATTAAGGTGCATGCAGGCACTAGTTCGTGTTCAAGCACGTGTAAGAGCTCGCAGGGTGAGATTGTCCCTAGAGGGACAAGAAGTGCAGAACATGCTCAACCAACGCCGCACCAAGGATGATCTCTTGAAACAAGCTGAGGAAGAATGGTGTGATAGCAAAGGAACATTGGAAGATGTTAAAACAAAATTACAGATGAGGCAAGAAGGAGCTTTCAAGAGAGAGAGAGCAATTGCATACTCTCTTGCCCAGAAGCAATGGAGATCAACCCCCATCTCTAATTCAAGAGCAAACACTTCATTTTCCTCTCTTAATAAACAAGAGATAGACAAGGCTAATTGGGGATGGAGTTGGTTGGAACGTTGGATGGCAGCTAAGCCATGGGAGAGTAGATTAATGGAACAAACCAATGCTGATGCTACAGATAAGACCCCTCCACCTCCAAAGAAATATGTGGACTCCTCAATTCCTAAAACATCAGAACCTTGCTCAGCCAAAGTTAGAAAGAACAATGTCACAACAAGAATTTCTGCTAGACCTCCCCATATTGGTCAAGCAACTCGTTCATCTTCAAGTCCAAGTTCTGATTTTCAGTATGATGAGAGCTCAGCTTCATCTTCACTATGCACATCTACAACACCAGTATCTGGGAATGCTGCATTGGCTTGTGACATGACAGAGGATAGTGGGAACACTAAGCCAAGTTACATGAACTTGACTGAGTCAACCAAGGCAAAGCAAAAAATGTGCAATCACCTCTACAACAGATCTCAAAGGCAGCAATCCATGGATGAGTTCCAGTTTCTCAAAAGGACAGCGGTTTTCTCTAATGGAGATTCCAAAAGCATTGATGGTTCTGACCCTTCAATCAACTATTCTAGGCCACTTTACCTACCAACCTACATGGATAAGAGGCCACGTTGA 1287 0.4538 MGASGKWVKALIGLKKPDKVEHVKEGGKKKKWRLWKSFSDKSESEGSHSPSVVADAFSAAMATVVRAPPKDFKLVRQEWAATRIQTAFRAFLARRALRALKGVVRLQALVRGRLVRKQAAVTLRCMQALVRVQARVRARRVRLSLEGQEVQNMLNQRRTKDDLLKQAEEEWCDSKGTLEDVKTKLQMRQEGAFKRERAIAYSLAQKQWRSTPISNSRANTSFSSLNKQEIDKANWGWSWLERWMAAKPWESRLMEQTNADATDKTPPPPKKYVDSSIPKTSEPCSAKVRKNNVTTRISARPPHIGQATRSSSSPSSDFQYDESSASSSLCTSTTPVSGNAALACDMTEDSGNTKPSYMNLTESTKAKQKMCNHLYNRSQRQQSMDEFQFLKRTAVFSNGDSKSIDGSDPSINYSRPLYLPTYMDKRPR* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02045 428 ProSiteProfiles IQ motif profile. 101 128 IPR000048 GO:0005515
Rops9g02045 428 PANTHER IQ-DOMAIN 5-RELATED 1 380 - -
Rops9g02045 428 Pfam IQ calmodulin-binding motif 101 118 IPR000048 GO:0005515
Rops9g02045 428 Pfam IQ calmodulin-binding motif 79 98 IPR000048 GO:0005515
Rops9g02045 428 ProSiteProfiles IQ motif profile. 77 105 IPR000048 GO:0005515
Rops9g02045 428 SMART iq_5 99 120 IPR000048 GO:0005515
Rops9g02045 428 SMART iq_5 76 98 IPR000048 GO:0005515
Rops9g02045 428 MobiDBLite consensus disorder prediction 278 335 - -
Rops9g02045 428 MobiDBLite consensus disorder prediction 258 335 - -
Rops9g02045 428 Coils Coil 150 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02045 Rops-Chr9 37692270 37699873 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02045 1 428 IQD Protein Family AT2G26180 60.000 3.03e-147 423
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02045 - - gmx:100787102 589.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02045 9 37692270 37699873 Rops10g01240 10 24974292 24976700 PCT