Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02032 ATGGCATTTCGATTTGGGCTACTTCTCCTTGCTTTGCTCATTTGTTTGAATGCCAATTCAGTTGATTCAGATGATGGAGCGACTTTGTTAGAGATAAAGAAGTCATTCAGGGATGTGGATAACGTTCTATATGATTGGACTGACTCACCATCATCAGATTATTGTGCTTGGAGAGGGATCACATGTGATAATGTTACCTTCAATGTTGTTGCACTCAATCTTTCAGGGTTGAATCTTGATGGTGAAATTTCTCCTGCAATAGGGAACCTTCAGAGCTTGGTCTCTATTGACCTCAGAGAAAACCAGCTATCAGGGCAGATACCAGATGAGATTGGTGACTGTTCTTCTTTGAAAAGCTTGGACTTGTCATTTAATGAAATACGAGGGGATATACCATTTTCAGTTTCTAAGTTGAAACAATTGGAAAATCTGATTTTGAAAAATAATCAGTTAATTGGACCAATTCCTTCAACATTATCTCAGATTCCTAACTTGAAGATTCTAGACCTGGCACAAAATAATCTCAGTGGTGAGATACCAAGGCTTATATACTGGAATGAAGTTTTGCAGTATCTGGGCTTGAGAGGGAACAATTTGGTCGGTTCATTATCACCAGACATGTGCCAGTTAACTGGGTTGTGGTACTTTGATGTGAGAAACAATAGCCTCACAGGAAGTATTCCTGAAAACATAGGCAACTGTACCTCCTTCCAGGTCTTGGATTTATCTTACAACCAGTTAACTGGAGAGATACCATTCAACATTGGATTTCTGCAAGTAGCAACCTTGTCATTACAAGGCAATAAACTCTCTGGGCATATGCCATCAGTGATTGGGCTCATGCAAGCACTTGCTGTCTTAGACTTGAGTTGTAACATGTTAAGTGGGCCAATCCCTCCTATCTTGGGAAATTTGACTTACACAGAAAAATTGTACTTGCATGGAAACAAGCTGACTGGCTTCATTCCCCCAGAGCTTGGAAATATGACAAAGCTTCACTATTTGGAACTGAATAATAACCATTTAAGTGGACATATTCCTCCCGAGCTTGGAAAGCTTACTGATCTTTTCGACTTAAATGTTGCTAACAACAACCTTGAGGGGCCAATTCCTAGTAATATTAGCTCATGTAAAAACCTTAACAGCCTCAATGTGCATGGGAATAAGCTGAATGGAACAATTCCTCCTGCTTTGCAGAGCTTGGAGAGTATGACATCTTTGAATCTTTCTTCCAACAATCTTCAAGGCTCTATTCCAATTGAACTGACAAGGATTGGGAATTTGGATACACTGGATATTTCAAACAACAATCTAATTGGCTCCATCGCTTCTTCCCTTGGAGACTTGGAGCATCTTCTGAAGCTGAATCTGAGCAGAAACCATTTAACAGGATTTATTCCAGCAGAGTTTGGTAATCTCAAAAGTGTCATGGAAATTGATCTTTCAAATAATCAACTCTCTGGCTTGATTCCTGAAGAACTTAGTCAGCTTCAGAACATAGTATCATTGAGGCTTGAAAACAACAAATTAACTGGGGATGTGGCATCACTTGTGAATTGTCTTAGTCTCTCTCAGCTTAATGTGTCTTTCAACAAATTAGTTGGTGTTATTCCCACGAGCAACAACTTTACCAGGTTTCCCCCTGACAGCTTCATTGGAAACCCTGGTCTTTGTGGTAACTGGCTGAATTTGCCCTGTCATGGTTCTCACCCTACAGAGCGAGTTACATTATCCAAGGCAGCTATTCTAGGAATTACACTTGGTGCTCTTGTGATTCTTCTCATGATACTGCTGGCAGCTTGCCGACCGCACAATCCATCTCCTTTTCCTGATGGATCACTTGACAAACCAGTTAAATACTCACCTCCAAAACTAGTGATTCTTCACATGAATATGGCACTTCATGTATACGAGGATATCATGAGGATGACTGAAAACCTGAGTGAGAAGTATATAATTGGATATGGTGCATCAAGCACAGTTTATAAATGTGTTCTTAAGAATTGCAAACCAGTGGCCATCAAGAGGCTCTATTCTCACTATCCGCAATGCTTAAAAGAATTTGAGACTGAACTCGAGACAGTTGGCAGCATTAAGCACCGGAATCTGGTCTGTCTCCAAGGCTACTCTTTATCCCCATATGGCCACCTTCTGTTTTATGACTACATGGAAAATGGCAGTCTATGGGATCTTCTTCATGGACCTACTAAGAAAAAAAAGCTTGATTGGGATCTGCGCCTGAAAATAGCACTTGGAGCAGCCCAAGGGCTTGCTTATCTACACCATGATTGCTGTCCTCGAATCATCCACAGGGATGTGAAATCATCAAATATTTTACTAGATGCAGACTTTGAGCCCCATCTCACTGATTTTGGCATTGCCAAAAGTCTCTGCCCTTCCAAGTCACATACTTCTACTTACATAATGGGCACAATTGGCTATATAGACCCTGAGTATGCCAGAACATCCAGGCTCACTGAGAAGTCTGATGTATACAGCTATGGTATTGTTTTACTTGAATTGCTAACTGGGAGGAAAGCTGTTGACAATGAATCCAACCTCCATCATCTGATTTTGTCCAAGACAGCAAACAATGCTGTAATGGAAACTGTTGATCCTGATATTACTGCCACATGCAAGGAGGACCTTGGAGCAGTAAAAAAGGTTTATCAGCTTGCTTTACTATGCACAAAGAGACAACTAGCTGATAGGCCTACAATGCATGAAGTGACACGTGTGCTGGGAAGTCTTGTGCCATCAGTCACCCCACCAAAACACCCAGCTCCACTGCCACCTGCATCACACCCATCTGCTAAAGTGCCATGCTACATGGATGAATATGCAAATCTCAAGACTCCACACTTAGTTAACTGCCCATCCATGAGCACCTCTGATGCACAGCTGTTCCTCAAGTTTGGAGAGGTAATCTCTCAGAATAGTGAGTGA 2946 0.4138 MAFRFGLLLLALLICLNANSVDSDDGATLLEIKKSFRDVDNVLYDWTDSPSSDYCAWRGITCDNVTFNVVALNLSGLNLDGEISPAIGNLQSLVSIDLRENQLSGQIPDEIGDCSSLKSLDLSFNEIRGDIPFSVSKLKQLENLILKNNQLIGPIPSTLSQIPNLKILDLAQNNLSGEIPRLIYWNEVLQYLGLRGNNLVGSLSPDMCQLTGLWYFDVRNNSLTGSIPENIGNCTSFQVLDLSYNQLTGEIPFNIGFLQVATLSLQGNKLSGHMPSVIGLMQALAVLDLSCNMLSGPIPPILGNLTYTEKLYLHGNKLTGFIPPELGNMTKLHYLELNNNHLSGHIPPELGKLTDLFDLNVANNNLEGPIPSNISSCKNLNSLNVHGNKLNGTIPPALQSLESMTSLNLSSNNLQGSIPIELTRIGNLDTLDISNNNLIGSIASSLGDLEHLLKLNLSRNHLTGFIPAEFGNLKSVMEIDLSNNQLSGLIPEELSQLQNIVSLRLENNKLTGDVASLVNCLSLSQLNVSFNKLVGVIPTSNNFTRFPPDSFIGNPGLCGNWLNLPCHGSHPTERVTLSKAAILGITLGALVILLMILLAACRPHNPSPFPDGSLDKPVKYSPPKLVILHMNMALHVYEDIMRMTENLSEKYIIGYGASSTVYKCVLKNCKPVAIKRLYSHYPQCLKEFETELETVGSIKHRNLVCLQGYSLSPYGHLLFYDYMENGSLWDLLHGPTKKKKLDWDLRLKIALGAAQGLAYLHHDCCPRIIHRDVKSSNILLDADFEPHLTDFGIAKSLCPSKSHTSTYIMGTIGYIDPEYARTSRLTEKSDVYSYGIVLLELLTGRKAVDNESNLHHLILSKTANNAVMETVDPDITATCKEDLGAVKKVYQLALLCTKRQLADRPTMHEVTRVLGSLVPSVTPPKHPAPLPPASHPSAKVPCYMDEYANLKTPHLVNCPSMSTSDAQLFLKFGEVISQNSE* 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02032 981 SUPERFAMILY RNI-like 203 536 - -
Rops9g02032 981 ProSitePatterns Protein kinases ATP-binding region signature. 653 675 IPR017441 GO:0005524
Rops9g02032 981 SMART LRR_typ_2 473 496 IPR003591 -
Rops9g02032 981 SMART LRR_typ_2 329 353 IPR003591 -
Rops9g02032 981 SMART LRR_typ_2 210 234 IPR003591 -
Rops9g02032 981 SMART LRR_typ_2 90 114 IPR003591 -
Rops9g02032 981 SMART LRR_typ_2 449 472 IPR003591 -
Rops9g02032 981 SMART LRR_typ_2 162 186 IPR003591 -
Rops9g02032 981 SMART LRR_typ_2 401 425 IPR003591 -
Rops9g02032 981 ProSiteProfiles Protein kinase domain profile. 647 929 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g02032 981 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 297 569 - -
Rops9g02032 981 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 187 296 - -
Rops9g02032 981 Pfam Leucine rich repeat N-terminal domain 23 63 IPR013210 -
Rops9g02032 981 CDD STKc_IRAK 653 917 - -
Rops9g02032 981 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 22 186 - -
Rops9g02032 981 Pfam Leucine rich repeat 116 175 IPR001611 GO:0005515
Rops9g02032 981 Pfam Leucine rich repeat 451 510 IPR001611 GO:0005515
Rops9g02032 981 SUPERFAMILY L domain-like 47 258 - -
Rops9g02032 981 Gene3D Ribonuclease Inhibitor 22 185 IPR032675 -
Rops9g02032 981 Gene3D Ribonuclease Inhibitor 346 441 IPR032675 -
Rops9g02032 981 Pfam Protein kinase domain 650 911 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g02032 981 ProSiteProfiles Leucine-rich repeat profile. 164 186 IPR001611 GO:0005515
Rops9g02032 981 Gene3D Ribonuclease Inhibitor 442 568 IPR032675 -
Rops9g02032 981 Gene3D Ribonuclease Inhibitor 259 345 IPR032675 -
Rops9g02032 981 ProSitePatterns Serine/Threonine protein kinases active-site signature. 768 780 IPR008271 GO:0004672|GO:0006468
Rops9g02032 981 SUPERFAMILY Protein kinase-like (PK-like) 633 940 IPR011009 -
Rops9g02032 981 Gene3D Ribonuclease Inhibitor 186 258 IPR032675 -
Rops9g02032 981 Gene3D Phosphorylase Kinase; domain 1 619 722 - -
Rops9g02032 981 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 618 722 - -
Rops9g02032 981 PANTHER LEUCINE RICH REPEAT KINASE 2 231 918 - -
Rops9g02032 981 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 723 925 - -
Rops9g02032 981 SMART serkin_6 647 914 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g02032 981 Gene3D Transferase(Phosphotransferase) domain 1 723 922 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02032 Rops-Chr9 37479213 37488153 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02032 92 980 Receptor kinase-like Gene Family AT5G07180 65.281 0.0 1128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Rops9g02032 Pkinase 5.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02032 K20718 - gmx:100782307 1818.13