Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02023 ATGCTGGGAAAACACAAAGACAAAGACAAAGGCAAAGACATGAAGAATGGCGATCCCGAGATGAACTTCAAGAACAGCCCTCAAACTATGCAGAAGGGAACCTCTCCATACGTGTATAGTAAATCATTCAATTCCAGTTCCAGGGCCAAGTCCCAGAAGAATGTGGAGCCACCTACTAGCCCCTTACCAGTTGGATGCTGTCGAGGCTTCAGCAATGGCAAGACTATGGTATCCATTGCCTCAGCATCACAACAAAATCAGCACCAGCAACGACAGCAAAGACTGGAAGTAAAGGTGGCAGATTTGGAAAAGGAAGTGCAAAAGGAGAGAGAACTACGAGTGATGTACAGGAAAAGAATGGAAAGGACACAAGACTACTTGAGGTACTGCCTTCAAATAGCAGAGGAGAATGGAATATTGGATCTCATCATCCACTGTAAAGGTGAACTTCAACAATCTCCTCTCTCTGTCCACTCCATTACCAGCCCTCGAATTCCCACTCCTCCACAGCATCACCATCACCACCACCACTCCAATCTAGCTGCCATCATCGATCAAGCCAAAATCAATGGATGGTATATAGATCCAATTGAGATTCAATTGGGAGAGAAAATCGGGGAGGGAACCACAGCAGACATTTATCAAGGAACATGGCGTGGACTTGATGTAGCTGTGAAGTGCATAACACCTGAGTTCTTCCTCACAAATGAAAACGGTGTCGTTTACTTCTCTCAAGAGCTAGAAACATTATCCAGGCAAAGACACCGTTTTATACTTCAGCTAATGGGTGCATGCCTTGACCCACCACACCATGCATGGGTGGTCACTGAGTATCTAAGCACCACGTTGAAAGAGTGGCTTCATGGCCCTGGAAACAGGCATAGAGAGAGAATGGTGCCACTTCCATCTTTGAAAGAAAGATTGGTGAGGGCATTGGAGATTGCACAAGCCATGCAGTATCTTCATGAACAAAAGCCTAAGCTCATTCATCGTGACTTGAAGCCTACTAACATTTTTCTCGATGATGCCATGCATGTTAGGGTTGCTGATTTTGGCCACGCTCGCTTCTTGGGTGACCATGAAATGGCTCTTACTGGAGAAATAGGAACATATGTGTACATGGCACCGGAGGTAATCCGATGTGAACCTTATAATGAAAAATGTGATGTGTATAGTTTTGGGATCATACTCAACGAGCTACTAACAGGAAATTACCCTTACATTGAGACGGAATATGGTCCCACCAAGATTGCAATGGAAGTTGTGGAGGGTAAGCTGAGGCCTGTGCTTCCATCTGATGATGTTGGTCAATTGGAAGAGCTCATTGGCCTTATATGCCTTTGCTGGGATGGAAATCCATCGACTCGACCATCTTTCGCAACAATCACTAGTAGCCTCAAAAGTTATTGCAAGAAGTTCCTTTAA 1425 0.4491 MLGKHKDKDKGKDMKNGDPEMNFKNSPQTMQKGTSPYVYSKSFNSSSRAKSQKNVEPPTSPLPVGCCRGFSNGKTMVSIASASQQNQHQQRQQRLEVKVADLEKEVQKERELRVMYRKRMERTQDYLRYCLQIAEENGILDLIIHCKGELQQSPLSVHSITSPRIPTPPQHHHHHHHSNLAAIIDQAKINGWYIDPIEIQLGEKIGEGTTADIYQGTWRGLDVAVKCITPEFFLTNENGVVYFSQELETLSRQRHRFILQLMGACLDPPHHAWVVTEYLSTTLKEWLHGPGNRHRERMVPLPSLKERLVRALEIAQAMQYLHEQKPKLIHRDLKPTNIFLDDAMHVRVADFGHARFLGDHEMALTGEIGTYVYMAPEVIRCEPYNEKCDVYSFGIILNELLTGNYPYIETEYGPTKIAMEVVEGKLRPVLPSDDVGQLEELIGLICLCWDGNPSTRPSFATITSSLKSYCKKFL* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02023 474 Pfam Protein kinase domain 201 463 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g02023 474 Coils Coil 85 119 - -
Rops9g02023 474 Gene3D Phosphorylase Kinase; domain 1 177 280 - -
Rops9g02023 474 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 84 466 - -
Rops9g02023 474 MobiDBLite consensus disorder prediction 21 58 - -
Rops9g02023 474 SMART serkin_6 199 474 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g02023 474 ProSitePatterns Serine/Threonine protein kinases active-site signature. 328 340 IPR008271 GO:0004672|GO:0006468
Rops9g02023 474 MobiDBLite consensus disorder prediction 1 19 - -
Rops9g02023 474 ProSitePatterns Protein kinases ATP-binding region signature. 205 226 IPR017441 GO:0005524
Rops9g02023 474 SUPERFAMILY Protein kinase-like (PK-like) 175 464 IPR011009 -
Rops9g02023 474 CDD STKc_MAP3K-like 205 466 - -
Rops9g02023 474 Gene3D Transferase(Phosphotransferase) domain 1 281 472 - -
Rops9g02023 474 MobiDBLite consensus disorder prediction 1 65 - -
Rops9g02023 474 ProSiteProfiles Protein kinase domain profile. 199 474 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02023 Rops-Chr9 37292961 37300832 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02023 192 472 MAP Kinase Kinase Kinase AT4G35780 34.752 2.56e-46 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-8 Rops9g02023 Pkinase 2.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02023 - - gmx:102666416 703.36