Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02020 ATGCCTATGCCACGACCCAGCACCTCAACCACACCTCCCACGTCTCGCGCGACCATACAGCTCGTATGGCAACATGCACGTGACTTTCAAGGTCCCCATCGAGCACGAGAGTGTGAGTCACTGTCCCCTGGTCCGGATTCGGTTGGGATCTTTTCCATTTCACAAAGTTGCAGTGGAGTGGCAACTCGAGCCTGTGGTCTCGTTAGTTTGGAACGTACAACGATTACAGAGATCTTTAAAGATAGTCCATCTTGGTTTCAAGAGTGTCGGAGCCTAGAAGTTTTCACAATGTTTCCCGCTGGATATGGAGGAACCGTTGAACTTGTTTACACTTGGGCTTATGCTCCAACGACATTGGCTCCTTTCCGGGATTTCTGGACTTTTAGATACACTACAAGTTTGGATAATGGCAGTCTTGTGGTTTGTGAGAGGTGGCACGACCCTAATCCAGCTGCTGCTGCTCGGTCTGTAAGGGCTGAAATGCTCCCTAGTGGCTACTTGATTCGACCATGTGATGGTGGAGGGCCAATCATCCATGTTGTAGATCGCCTAAATCTAGAGGTGTAG 567 0.4974 MPMPRPSTSTTPPTSRATIQLVWQHARDFQGPHRARECESLSPGPDSVGIFSISQSCSGVATRACGLVSLERTTITEIFKDSPSWFQECRSLEVFTMFPAGYGGTVELVYTWAYAPTTLAPFRDFWTFRYTTSLDNGSLVVCERWHDPNPAAAARSVRAEMLPSGYLIRPCDGGGPIIHVVDRLNLEV* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02020 188 SUPERFAMILY Bet v1-like 42 186 - -
Rops9g02020 188 Gene3D - 51 188 IPR023393 -
Rops9g02020 188 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 39 187 IPR044830 GO:0003700
Rops9g02020 188 Pfam START domain 42 186 IPR002913 GO:0008289
Rops9g02020 188 ProSiteProfiles START domain profile. 23 188 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02020 Rops-Chr9 37248516 37249082 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02020 41 187 Homeobox Transcription Factor Family AT5G60690 74.342 3.36e-74 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02020 K09338 - pvy:116143871 243.817