Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02016 ATGGCATTTTTACTTCTCTCATCACCTTTGAAACTTCCTATTATAATTCATAGGAAGGTCACCATGAAGCCACCTCATGAAACTATAGCTGTGGAGCATTTATATGTTGTGTGCACCGTGATCCTTTCTTTTCATATCAATTGTACCAAAATGGCAGATAAAAATCCAAGACCACTAGATTCACCTGACAGTAATTTTACCAACCAGTGGCCTTTTGAGCTCTCCGAGTACTTGAAATTCGATGATAATAATCAATGGCTACACGATGATCCTGAGTCATTTGTTTCTGACCATGTTTCAAACCAAGTTTATCAAGCCAACGAAGTAGATGATTTTGGAGGGGGTGGCAGCCACTTTGAGGGGTCTTCTAGCAGAGATACTAGCAGTGGACTCGAGAAGAAGGAAGTTAGAGAGAGAGTTGCATTCAAAACAAAGTCAGAGGTTGAAATACTAGATGATGGGTACAAATGGAGGAAGTATGGAAAGAAAAGGGTGAAGAACAGCCCCAATCCAAGGAATTACTATAGGTGTTCAGTAGAAGGATGCCCTGTAAAAAAGAGAGTTGAGAGAGATAAGGATGATTCAAGATATGTAATAACAACCTACGAAGGCATGCACACTCACCCAAGTTCTTACTAG 639 0.4022 MAFLLLSSPLKLPIIIHRKVTMKPPHETIAVEHLYVVCTVILSFHINCTKMADKNPRPLDSPDSNFTNQWPFELSEYLKFDDNNQWLHDDPESFVSDHVSNQVYQANEVDDFGGGGSHFEGSSSRDTSSGLEKKEVRERVAFKTKSEVEILDDGYKWRKYGKKRVKNSPNPRNYYRCSVEGCPVKKRVERDKDDSRYVITTYEGMHTHPSSY* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02016 212 FunFam WRKY transcription factor 57 137 211 - -
Rops9g02016 212 Gene3D WRKY domain 138 204 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops9g02016 212 SUPERFAMILY WRKY DNA-binding domain 144 210 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops9g02016 212 ProSiteProfiles WRKY domain profile. 146 211 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops9g02016 212 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 97 210 IPR044810 GO:0003700
Rops9g02016 212 Pfam WRKY DNA -binding domain 152 209 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops9g02016 212 SMART WRKY_cls 151 210 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02016 Rops-Chr9 37199022 37200583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02016 76 210 WRKY Transcription Factor Family AT5G26170 51.656 4.78e-43 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Rops9g02016 WRKY 1.1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02016 - - gmx:100808823 260.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02016 9 37199022 37200583 Rops9g02016 9 37199022 37200583 ECH