Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02010 ATGGGGTGGTTCCCTTTCCACCTTCACAACCTAAAGAGGAACCAAAGAAGGAGCCAACCAAGCTTCTCTCCTCCTCCTCCTTGTGGTGGAGTAGGAGGTGGTGGTGGCAACTTTATTTTAACACATTTAACAATGTCTTCCCATGGTGGTAGCACAATAAATGTTACCATGGTGGCTGTAGACAAAGACAAGAACAGTGGCCATGCCTTTCGTTGGACAACTAATCATATTGATAATCCAATCATCATTGCAGTCCATGTTAAGCACAAAAACATTCCTCATGAGGGTACCAATGTTTTCCCTCCTGATGAAGATGATGTGGCTAATATTTTCCATCCCTTGCGCCAAATGTGTCATCGTAAAGTCGTTAAGATGAAAGAAGCAGTAATTGATGATAGCGATGTTGTTAGAGGAATTTTGGAATATGCACAAAGGAATCACATTCAAACTATTGTTCTTGGTGCACCCTCCTCAACCAAGCATGCTCTAACAAGGTCTCTACACATGAGAAGCGTAAGCAAAAAATTTAAAGGCCCTGATGTGCCAACAGTCATAATGAGATCAGCCCCAGATTACAGTTCAGTGTATGTAATTTCAAAAACAAAGATAGTGGGAGCTCGACCAGCAACATGCCCATTGGGAAGTTTGGTTGCACCACCAGAAAATGGAGTAAGGGTGCAAACACTTAGAAGAGGGAGCACCAACAGTAGATCAGAAAGATCACCTCTATATGAGATTTCAAGGAGTTCTTCAGCTAATCAGTCAATGGATAGAATTGGGACTCTTCATGGACACAGGTCACCATTTAGCCAAGACTCAAGCTCCGGTGAAAGTGACTCTTCAGGGTCACATAAGTTTGGTTCAAGAAATCTAACTAAACAAGATTGGGATTCAAATTTTGCATCAGATTCCCAATCATTAGAAGACATGGAAGCTGAGATGAAAAGATTGAGGCTCCAATTGAAGCAAACAATGGACATGTACAGTTCAGCTTGCAAAGAAGCAATCTCAGCCCAAAACAAGGCTAAAGAGATTAATCAATGGAAACTGGAGGAAGCACGTAAGGTTGAGGAAGTTAGGTTGGCTAAAGAGGCAGCTCTTGCACAGGTAGAAAAGGAGAAGGCTAAAGGAATTGCTGCATTGAAAGCAGCTGAGGAAGCCATGAAAATGGCTGAAAAGGAAGCACAGAGAAGACTGCTTGCAGAGATGAAGAGTAGGAATGAGGTAGAAGACAAGGAGCGAGCATTAACTGTGTTGGCTCAGAAGGATATTCGATATAGAAAATACACCATAGAGGACATTGAAAATGCAACTCGAGAATTCTCCCTAACAATGAAAATAGGTGAAGGTGGATATGGACCTGTGTTCAAAGGCCATCTTGATCATACACCAGTTGCAATCAAGCTTCTAAACCCTGAAGCTAAGCAAGGCAGGAAGCAGTTCCAACAAGAGGTTGAGGTATTATGCAACATAAGGCATCCTAATATGGTCCTCCTCCTTGGTGCATGTCCTGATTATGGATGTTTGGTGTATGAATACATGGATAATGGTAGCTTAGAAGATAGATTATTGCGAAAACATAACAGTCCCCCTATTCCATGGAGGAAACGTTTTGAAATAGCTGCTGAGATTGCAACTGCACTCCTTTTCCTTCACCAAACAAAGCCAGAACCCCTTGTGCACAGAGACCTTAAACCAGCAAACATTCTCTTGGATAGAAACTTTGTGAGTAAAATAAGTGATGTTGGTCTAGCAAGACTAGTTCCACCTTCTGTAGCTGATTCTGTCACACAATATCACATGACTGCAGCTGCTGGAACCTTTCATTACATTGATCCTGAGTACCAACAAACTGGGAAGCTAACAACAAAATCAGATATGTATTCCTTTGGGATAATGCTACTACAGATAATTACAGCCAAGCCTCCAATGGGACTTGCTCACCATGTTAAAAGGGCAATTGAAAACGGAACTTTTTCAGATATGCTTGATCCTGTTGTGACTGATTGGCCAATTGAAGAGACTCTAGCATTTGCCAAACTCTCATTGAGTTGTGCTGAGCTTAGCAAGAAGGATAGGCCAGATCTTGCATCAGTAGTTGTGCCAAAGCTTAATCGTTTAAGAGATTTTGGGTACAGATTACAGAATAATAATAAGAATCACAGCCACGCACCACGCCCTCCTACACCTACACGAAGTTCACATTGA 2208 0.4194 MGWFPFHLHNLKRNQRRSQPSFSPPPPCGGVGGGGGNFILTHLTMSSHGGSTINVTMVAVDKDKNSGHAFRWTTNHIDNPIIIAVHVKHKNIPHEGTNVFPPDEDDVANIFHPLRQMCHRKVVKMKEAVIDDSDVVRGILEYAQRNHIQTIVLGAPSSTKHALTRSLHMRSVSKKFKGPDVPTVIMRSAPDYSSVYVISKTKIVGARPATCPLGSLVAPPENGVRVQTLRRGSTNSRSERSPLYEISRSSSANQSMDRIGTLHGHRSPFSQDSSSGESDSSGSHKFGSRNLTKQDWDSNFASDSQSLEDMEAEMKRLRLQLKQTMDMYSSACKEAISAQNKAKEINQWKLEEARKVEEVRLAKEAALAQVEKEKAKGIAALKAAEEAMKMAEKEAQRRLLAEMKSRNEVEDKERALTVLAQKDIRYRKYTIEDIENATREFSLTMKIGEGGYGPVFKGHLDHTPVAIKLLNPEAKQGRKQFQQEVEVLCNIRHPNMVLLLGACPDYGCLVYEYMDNGSLEDRLLRKHNSPPIPWRKRFEIAAEIATALLFLHQTKPEPLVHRDLKPANILLDRNFVSKISDVGLARLVPPSVADSVTQYHMTAAAGTFHYIDPEYQQTGKLTTKSDMYSFGIMLLQIITAKPPMGLAHHVKRAIENGTFSDMLDPVVTDWPIEETLAFAKLSLSCAELSKKDRPDLASVVVPKLNRLRDFGYRLQNNNKNHSHAPRPPTPTRSSH* 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02010 735 ProSitePatterns Serine/Threonine protein kinases active-site signature. 559 571 IPR008271 GO:0004672|GO:0006468
Rops9g02010 735 Pfam Universal stress protein family 57 175 IPR006016 -
Rops9g02010 735 ProSiteProfiles Protein kinase domain profile. 441 704 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g02010 735 Gene3D HUPs 41 176 IPR014729 -
Rops9g02010 735 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 57 174 - -
Rops9g02010 735 MobiDBLite consensus disorder prediction 217 299 - -
Rops9g02010 735 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 414 513 - -
Rops9g02010 735 SMART serkin_6 441 704 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g02010 735 SUPERFAMILY Protein kinase-like (PK-like) 424 700 IPR011009 -
Rops9g02010 735 MobiDBLite consensus disorder prediction 227 299 - -
Rops9g02010 735 Coils Coil 353 401 - -
Rops9g02010 735 PANTHER OS02G0152300 PROTEIN 56 713 - -
Rops9g02010 735 Coils Coil 300 327 - -
Rops9g02010 735 CDD STK_N 55 200 - -
Rops9g02010 735 Gene3D Phosphorylase Kinase; domain 1 419 513 - -
Rops9g02010 735 Gene3D Transferase(Phosphotransferase) domain 1 514 724 - -
Rops9g02010 735 Pfam Protein tyrosine and serine/threonine kinase 443 700 IPR001245 GO:0004672|GO:0006468
Rops9g02010 735 MobiDBLite consensus disorder prediction 713 735 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02010 Rops-Chr9 37105801 37109488 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02010 125 711 Receptor kinase-like Gene Family AT5G12000 59.385 0.0 679
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Rops9g02010 PK_Tyr_Ser-Thr 2.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02010 - - gmx:100786386 925.62