Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02006 ATGATGCACATGACCTTGTATTGGGGCAAAAGGGTGACCCTACTCATCGATTCGTGGAAGACCGATTCGTGGGTGAGTTATGCGCTGAGTTTACTCGCTTGCCTCGTTGTTGCCGCTTTTTATCAGTATCTTGAGAATCGCCGGATTCGGCTGAAGCTCGTCGCCGGCGAGAGGAGGCAGTCGCCGGAGATCCAGACCCCTCTTTTACGATGGAATAAAGTCGCCAGAAATAAGGTCGCCGAAGCAGTTCTTTTTGGGGTGAACTCGGCGATTGGGTATTTGTTGATGTTGGCCATAATGTCATTCAATGGAGGGGTTTTTTTGGCCATTGTGGTGGGTCTCACCCTTGGTTACCTCTTCTTTAGGGGTCAGAGTGAAGATGCTGCACTTGTCGTTGATAATTCTTGTGCATGCGCTTAG 420 0.4976 MMHMTLYWGKRVTLLIDSWKTDSWVSYALSLLACLVVAAFYQYLENRRIRLKLVAGERRQSPEIQTPLLRWNKVARNKVAEAVLFGVNSAIGYLLMLAIMSFNGGVFLAIVVGLTLGYLFFRGQSEDAALVVDNSCACA* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02006 139 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 1 127 IPR007274 GO:0005375|GO:0016020|GO:0035434
Rops9g02006 139 Pfam Ctr copper transporter family 4 121 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02006 Rops-Chr9 37070012 37070431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02006 1 139 Inorganic Solute Cotransporters AT5G20650 55.479 6.88e-55 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02006 K14686 - gmx:100795071 218.394