Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01998 ATGTCAAAGAAGAGTTTGAGTCAAACAAAGGATGATGAATCAGTTTCAGAAGCTAGAGTTCAAGTCCCAGAAGAAATAGAGTGGCACATGATTGACAGGTCCAAGTTCTTCTTCCTAAACGCAACCTTGTCCTCGTGTCTAACAACTGCTCTTTACCCTGCTTATCTGTTGAAGACACGAAAGCAAGTTTCCTCAGCAAAGATCTCTTTTCACAGCATCATGCGCTATGAAGGCCTAAGAGGGTGCTATAGAGGTTTAGGCACTTCTTTGATGGGAACAATCCCTGCAAGAGCACTTTCCATGTCAGCACTTGAAGTTACAAAGAGTCAAGTTGGCACTGCTTTTGTTAGTTTGGGGTTTTCAGATACTAATGCCACAACCATAGCTAGTGCTGCTGGTGGGGTGGCTTCTGCTGTGGCTGCACAGGTAGTTTGGACCCCAGTTGATGTTGTGAGCCAAAGACTTATGGTTCAAGGAAGCAAAAATGTAACCCATGATCTTAACAAATTTAATAGTTACAAGAATGGTTCTGATGCTGTCAGGAAAATTCTCCATGTTGATGGACCAAGAGGGTTCTATAGAGGATTTGGGGTTTCATTAGTGACTTATGCACCTTCTCATGCTGTTTCCCAAGCTTTGTATTCTATGATACATAGGCTCATATGGAATGAGATTGGTTTGGTCAACGGTTATGGTTTTAGGCATGATGATTCCAAGGCAATGATCGCAGGTGTACAAGGGGTGAGTGCGGTTATGGCTAGTGGGATTTCGGCAATTATAACTATGCCACTTGACACAATCAAGACAAGGTTGCAGGTTTTGGATGTAGAGGAGAATGGAAGAAAGAGGCCACTTACTTTTTTGCAGACTCTGAGGAATTTGGTGAAGGAAGCTGTTTTCCAAATAAAAAACAAGCATCCTACCACCACCCACCACCGCTCATCACCACCCACTACTGCCCACCACCGTCGGCCGCCACCCACCACCACCGTCGGCCGCCACCAACCACCACCCACCACTGTCGTCGGTCGCCGGTCTCCGCCCACCACCCACAACTGCCGGACGCTAACCACCATCGTTGCCCGTCTCCCACCACCACCACCGGCCACCGCCAACCATCACCGCTGGCGGCCACCCACCGCCTACCACCACCATCGGCCGCCACCACCCACCACATCCAACCACCGTTGTCGGTCACCGGTCTCCGCCCACCACCCACCACTGCCGAACGCCAACCACCATCGTTGCTCGCCGCCAACCACCACCGCAGCCGCCTGCCGCGGGCCACCATAA 1293 0.5035 MSKKSLSQTKDDESVSEARVQVPEEIEWHMIDRSKFFFLNATLSSCLTTALYPAYLLKTRKQVSSAKISFHSIMRYEGLRGCYRGLGTSLMGTIPARALSMSALEVTKSQVGTAFVSLGFSDTNATTIASAAGGVASAVAAQVVWTPVDVVSQRLMVQGSKNVTHDLNKFNSYKNGSDAVRKILHVDGPRGFYRGFGVSLVTYAPSHAVSQALYSMIHRLIWNEIGLVNGYGFRHDDSKAMIAGVQGVSAVMASGISAIITMPLDTIKTRLQVLDVEENGRKRPLTFLQTLRNLVKEAVFQIKNKHPTTTHHRSSPPTTAHHRRPPPTTTVGRHQPPPTTVVGRRSPPTTHNCRTLTTIVARLPPPPPATANHHRWRPPTAYHHHRPPPPTTSNHRCRSPVSAHHPPLPNANHHRCSPPTTTAAACRGPP* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01998 430 ProSiteProfiles Solute carrier (Solcar) repeat profile. 125 220 IPR018108 -
Rops9g01998 430 SUPERFAMILY Mitochondrial carrier 30 297 IPR023395 -
Rops9g01998 430 MobiDBLite consensus disorder prediction 303 430 - -
Rops9g01998 430 Pfam Mitochondrial carrier protein 248 297 IPR018108 -
Rops9g01998 430 Pfam Mitochondrial carrier protein 128 222 IPR018108 -
Rops9g01998 430 Pfam Mitochondrial carrier protein 48 110 IPR018108 -
Rops9g01998 430 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 18 298 - -
Rops9g01998 430 Gene3D Mitochondrial carrier domain 36 305 IPR023395 -
Rops9g01998 430 ProSiteProfiles Solute carrier (Solcar) repeat profile. 32 110 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01998 Rops-Chr9 36915916 36917431 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01998 19 298 Chloroplast and Mitochondria Gene Families AT5G26200 54.355 1.11e-103 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01998 K15121 - gmx:100784202 341.658