Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01988 ATGGGTTACCTCAATTCAGTTTTGTCCTCTTCAAGTCAGGTTAATGCTGCTGAAGATTCACCTGTGAGCGGTGGGGGTCTCAGTCAGAATGGCAAATTCAGCTATGGGTATGCTAGCTCCCCCGGCAAGAGATCTTCCATGGAAGATTTTTATGAGACCAGAATTGATGGCGTTGATGGTGAAATTGTTGGACTTTTTGGAGTTTTTGATGGTCATGGAGGTGCTCGTGCTGCTGAGTATGTCAAGCAAAACCTATTTAGTAACTTGATCAAACACCCAAAATTCATTTCCGACACCAAATCTGCAATAGCTGATGCATATAACCATACCGACTCTGAATTTCTGAAATCAGAAAATAATCAAAACAGAGATGCTGGATCAACCGCTTCCACTGCCATTCTTGTTGGTGATCGTTTGCTTGTTGCGAATGTTGGGGACTCCAGAGCTGTTATATGCAGGGGTGGAAATGCTATTGCTGTTTCTCGAGATCACAAACCAGACCAAACTGATGAGAGGCAAAGGATAGAAAATGCAGGGGGCTTTGTTATGTGGGCTGGAACTTGGAGAGTTGGTGGTGTTCTTGCTGTTTCTCGAGCATTTGGTGATAGACTCCTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGGAAGAAAAAGTTGATAGCTCTCTTGAATTTCTTATATTGGCCAGTGATGGGCTATGGGATGTTGTCTCAAACGAGGAAGCTGTTGCTATGATTAAACAAATTGAGGATGCAGAGGAGGCAGCAAAGAGTCTGATGCAAGAAGCATATCAGAGAGGTAGTTCTGACAACATTACTTGTGTCGTTGTTCGTTTCTTGATGAACCAAGGTGCTTCTTCTCGTAGTAGCTCTGGCTAA 882 0.4354 MGYLNSVLSSSSQVNAAEDSPVSGGGLSQNGKFSYGYASSPGKRSSMEDFYETRIDGVDGEIVGLFGVFDGHGGARAAEYVKQNLFSNLIKHPKFISDTKSAIADAYNHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIENAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKVDSSLEFLILASDGLWDVVSNEEAVAMIKQIEDAEEAAKSLMQEAYQRGSSDNITCVVVRFLMNQGASSRSSSG* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01988 293 Gene3D - 26 285 IPR036457 -
Rops9g01988 293 ProSiteProfiles PPM-type phosphatase domain profile. 34 280 IPR001932 -
Rops9g01988 293 SMART PP2C_4 24 278 IPR001932 -
Rops9g01988 293 SUPERFAMILY PP2C-like 28 280 IPR036457 -
Rops9g01988 293 SMART PP2C_SIG_2 45 280 IPR001932 -
Rops9g01988 293 FunFam probable protein phosphatase 2C 59 26 284 - -
Rops9g01988 293 CDD PP2Cc 33 280 IPR001932 -
Rops9g01988 293 ProSitePatterns PPM-type phosphatase domain signature. 65 73 IPR000222 GO:0043169
Rops9g01988 293 Pfam Protein phosphatase 2C 63 273 IPR001932 -
Rops9g01988 293 Coils Coil 243 267 - -
Rops9g01988 293 PANTHER PROTEIN PHOSPHATASE 26 279 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01988 Rops-Chr9 36674177 36680256 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01988 1 292 PP2C-type Phosphatase Gene Family AT4G31750 90.411 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01988 K17506 - gmx:547661 545.428