Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01978 ATGGAGGAGATGAAAACAAACACTGTATTTGGTAAGTACGAGATTGGGAGGGTTCTTGGTAAAGGAACATTTGCCAAGGTGTACTATGGCAAAGAAATTTCAACTGGTGAAGGTGTTGCAATCAAGGTGATCAACAAAGATCGTGTGAAGAAAGAAGGTATGATTGAACAAATAAAACGTGAGATTTCAGTGATGAGGTTAGTGAGACACCCAAATATCGTTAACCTCAAAGAAGTAATGGCAACAAAGACCAAGATCTTGTTTGTGATGGAGTACATACGTGGCGGTGAACTATTCGCTAAGGTTGCAAAAGGGAAACTCAACGAAGATCTAGCACGCAAGTATTTCCAACAATTAATCAGCGCCGTCGATTTTTGTCACAGTAGAGGTGTCTCTCACCGTGATCTAAAGCCTGAGAATCTATTACTCGATGAAAACGAGAACCTTAAAGTCTCCGACTTTGGCTTTTCCGCGTTGCCGGAACAGCTTCGCCTAGACGGGCTTTTACACACACAGTGTGGAACACCAGCTTATGTTGCTCCTGAAGTGTTAAGGAAAAAAGGGTATGATGGTTTCAAAGCTGATACTTGGTCATGTGGGGTTATTCTCTATGCTTTGCTTGCAGGGTTTCTACCCTTTCAACATGAGAATATAATAACCATGTATAACAAGGTTTTCAGAGAAGATTATCAATTTCCTCCATGGTTTTCACCTGAATCAAAGAGGTTGATCTCGAAGATTCTAGTAGCTGATCCAGAGAGAAGAATCGCCATCCCTTCAATCATGCGTGTTCCTTGGTTCTTAAAAGGGTTCTCATCGACAAAACCAAGTGATTCTAATAATGTTCCAGAACATGACAACGACAAAACATCCAATGTTGTTGTTGCTTCTTCAACTCCGAAATTCTTCAATGCGTTTGAGTTTATCTCTTCAATGTCTTCGGGGTTTGATCTTTCGAATTTGTTTGAGGAAAAGAAGAAAAGGGGTTCGGTTTTCACTTCAAAGTTTTCAGCTTTGGAGATTGCGTCTAAGATTGAAGGTGTAGCTAAAAGGTTGAGCTTTAAGGTGGCGAAGGTGAAGGATTTTAAGCTAACGCTTCAGGGTATGTCGGAGGGGAGAAAGGGGAGGTTGTCCGTCTCGGCGGAGATATCGGAGGTGGCGCCGGAACTCACGGTGGTTGAGTTTTCAAAGTGCTCCGGTGACACCTTGGAATATGCAAAGTTTTGTGAAGATGATGTTAGGCCAGCGTTGAAAGAGATTGTTTGGACTTGGCAGGGTGAGTAA 1284 0.4229 MEEMKTNTVFGKYEIGRVLGKGTFAKVYYGKEISTGEGVAIKVINKDRVKKEGMIEQIKREISVMRLVRHPNIVNLKEVMATKTKILFVMEYIRGGELFAKVAKGKLNEDLARKYFQQLISAVDFCHSRGVSHRDLKPENLLLDENENLKVSDFGFSALPEQLRLDGLLHTQCGTPAYVAPEVLRKKGYDGFKADTWSCGVILYALLAGFLPFQHENIITMYNKVFREDYQFPPWFSPESKRLISKILVADPERRIAIPSIMRVPWFLKGFSSTKPSDSNNVPEHDNDKTSNVVVASSTPKFFNAFEFISSMSSGFDLSNLFEEKKKRGSVFTSKFSALEIASKIEGVAKRLSFKVAKVKDFKLTLQGMSEGRKGRLSVSAEISEVAPELTVVEFSKCSGDTLEYAKFCEDDVRPALKEIVWTWQGE* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01978 427 FunFam Non-specific serine/threonine protein kinase 298 422 - -
Rops9g01978 427 SMART serkin_6 13 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01978 427 ProSitePatterns Serine/Threonine protein kinases active-site signature. 131 143 IPR008271 GO:0004672|GO:0006468
Rops9g01978 427 Pfam Protein kinase domain 13 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01978 427 FunFam Non-specific serine/threonine protein kinase 4 92 - -
Rops9g01978 427 FunFam Non-specific serine/threonine protein kinase 6 301 - -
Rops9g01978 427 Gene3D Phosphorylase Kinase; domain 1 2 92 - -
Rops9g01978 427 ProSitePatterns Protein kinases ATP-binding region signature. 19 51 IPR017441 GO:0005524
Rops9g01978 427 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 5 417 - -
Rops9g01978 427 Gene3D Transferase(Phosphotransferase) domain 1 94 272 - -
Rops9g01978 427 Gene3D Kinase associated domain 1, KA1 298 423 - -
Rops9g01978 427 ProSiteProfiles Protein kinase domain profile. 13 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01978 427 ProSiteProfiles NAF domain profile. 298 323 IPR018451 GO:0007165
Rops9g01978 427 CDD CIPK_C 304 418 - -
Rops9g01978 427 SUPERFAMILY Protein kinase-like (PK-like) 9 289 IPR011009 -
Rops9g01978 427 Pfam NAF domain 300 358 IPR004041 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01978 Rops-Chr9 36541087 36542873 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01978 2 427 CBL-interacting serine-threonine protein kinases AT5G25110 67.281 0.0 614
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Rops9g01978 Pkinase 7.9e-73 CL0016