Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01977 ATGGAATCATCAACATGCGTGGATACTTCACTCAATCTCAACGTTGTTCCTTCTCTGCACATGGATGAGGTTTTTGTTGAAGAGTTGCATCGTCTAAGTTGTGAGAACAAGAGGCTGAGTGAGACACTGACACACATGTGTGGGAGCTATCAAGCTATGCAAAAGCAATTGAGCCAATTGTTGAACAGAAATCTTGAACACCCCACAGAACAATCAAGGAAGAGAAAAGCTGAGAGTGAAAATTGTATCAGCACCATCACCGAGGAGGAATCATTAATCAAAAGGTCCCATATCACCTCCCCAAAGGTTTCCAAGGTTCTTGTGAAGACTGAAGCATCTAACACTAGCTTATATGTGATGGATGGATATCAATGGAGGAAATATGGTCAGAAGGTTACTAGAGATAACCCCTCTCCCAGAGCTTACTTCAGGTGCTCCTGTGCCCCAAGTTGCCCAGTGAAAAAGAAGGTGCAGAGAAGTTTAGAAGACCCTACCATATTGGTTGCAACTTATGAAGGAGAGCACAACCATGGTCATCGGCGAGATGAAATTTCAATGGTGTCGTCAAGTCAAATTGAAGAAACTCCAGTAGGGTCAAATCCTATTTCCTCACCTACTTCCATTATTCCAAGTACATGCCCAACAGTAACGCTTGACTTGGTTAATGACGACCCAACAAAGTCGTCTATTCAGCAATTTTTGGCTAAACAAATGGCTACTTTGACAAAGGATCCCAATTTCACAGCAGCACTTGCCACTGCCATTTCAACAAGAATTCTAGACCAGACTTCTAAGGCCAGATGGTGA 807 0.43 MESSTCVDTSLNLNVVPSLHMDEVFVEELHRLSCENKRLSETLTHMCGSYQAMQKQLSQLLNRNLEHPTEQSRKRKAESENCISTITEEESLIKRSHITSPKVSKVLVKTEASNTSLYVMDGYQWRKYGQKVTRDNPSPRAYFRCSCAPSCPVKKKVQRSLEDPTILVATYEGEHNHGHRRDEISMVSSSQIEETPVGSNPISSPTSIIPSTCPTVTLDLVNDDPTKSSIQQFLAKQMATLTKDPNFTAALATAISTRILDQTSKARW* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01977 268 FunFam WRKY transcription factor 40 104 181 - -
Rops9g01977 268 SUPERFAMILY WRKY DNA-binding domain 117 179 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops9g01977 268 Gene3D WRKY domain 102 179 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops9g01977 268 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 24 259 IPR044810 GO:0003700
Rops9g01977 268 SMART WRKY_cls 119 179 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops9g01977 268 ProSiteProfiles WRKY domain profile. 121 177 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops9g01977 268 Pfam WRKY DNA -binding domain 121 177 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01977 Rops-Chr9 36515039 36516433 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01977 3 262 WRKY Transcription Factor Family AT1G80840 43.564 5.72e-71 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Rops9g01977 WRKY 2.8e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01977 - - gmx:100810978 317.005