Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01974 ATGGATGAAAAGGCTGAAACTCTTCAAGCGGAGTTACAACATGTGAGAGAGGAGAACAATACTCTAAGACTGATGCTTGAACTTCTGAGTAGCAAGTGCCAAAAGCTTGAGTCCCAACTTCAAGAGATCAACGAGGCAGAAGAAAAGGGTATCAGTGTAAATCAAATTGGGTCAGTGTCTAACCTTGATACAAACAAGAAAGCAAGACTAGAGTTTATTCCCACAGCAAAAAAGCCATTACAAGTCTTTGTCAGAACTCACCCCATGGATGATAGTTTGATAATTAAAGATGGTTATCAGTGGAGGAAGTACGGCCAGAAGGTTACCAAAGAAAATGCTTCTCCTCGAGCTTACTTTAGGTGCTCCATGGCTCCCAGTTGCCCAGCCAAAAAGAAGGTGCAAAGATGCACACATGATAGGTCTATCCTTGTTGCAACTTATGATGGAGAGCACAACCATGGTACCCTTAATGATTTATGCATACCATCTTCATCCACACCTAAAGGCTCATCAATGGCTAATAAGTTACCTCCAACAATCCTAACAAATGGCAAAGAAGCCATGAACATTGACTTTGCTATTTCTGGTTGGCCTCAAACAGATACGAGACTTCGTGAGAATTCCATGCAACAGTGTGACCATGGCAGCAACATAAAAGTTGAAGAATATGTTAGTTCTATAATCAAAGATCCCGACTTCACTGTGGCATTAGCTGAAGCAGTTGCCTGCACCATCACTGGTCCACGTAAGCAACAAGATCTAAACCTTAATTTGGATCTTCCGGAAGAGTGA 792 0.4192 MDEKAETLQAELQHVREENNTLRLMLELLSSKCQKLESQLQEINEAEEKGISVNQIGSVSNLDTNKKARLEFIPTAKKPLQVFVRTHPMDDSLIIKDGYQWRKYGQKVTKENASPRAYFRCSMAPSCPAKKKVQRCTHDRSILVATYDGEHNHGTLNDLCIPSSSTPKGSSMANKLPPTILTNGKEAMNIDFAISGWPQTDTRLRENSMQQCDHGSNIKVEEYVSSIIKDPDFTVALAEAVACTITGPRKQQDLNLNLDLPEE* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01974 263 Gene3D WRKY domain 81 155 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops9g01974 263 ProSiteProfiles WRKY domain profile. 90 156 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops9g01974 263 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 5 250 IPR044810 GO:0003700
Rops9g01974 263 SUPERFAMILY WRKY DNA-binding domain 89 154 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops9g01974 263 Pfam WRKY DNA -binding domain 96 153 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops9g01974 263 Coils Coil 5 49 - -
Rops9g01974 263 SMART WRKY_cls 95 155 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01974 Rops-Chr9 36478085 36480900 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01974 2 253 WRKY Transcription Factor Family AT1G80840 36.644 2.99e-40 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Rops9g01974 WRKY 6.3e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01974 - - ccaj:109791737 357.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01974 9 36478085 36480900 Rops10g01348 10 26190475 26191850 PCT