Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01973 ATGGCATTGTTCCGCAAGTTCTTCTATAAGAAGCCCCCTGAGGGGCTTCTAGAAATCACTGAAAGGGTTTATGTCTTTGATTACTGCTTTACCACGGATGTTATGGAAGAAGATGAGTACAAAGTGTATATAGGGGGAATAATTGGGCAACTTCTTGATCACTTCCCTGATGCTTCATTTATGGTGTTCAACATGCGGGAGGGTCAACACCAAAGCCAGATATCAAACATTTTGTGTGACTATGATATGACTGTGATGGACTATCCTCGACAATATGAAGGTTGCCCATTACTCACCATGGAGATGATCCACCATTTCTTGAGATCAGGTGAAAACTGGCTTCAACTTGGGCAACAAAATGTTGTTCTGATGCATTGTGAACGAGGTGGGTGGCCAGTTTTAGCATTTATGGTGGCTGCACTCTTAATTTATAGAAAGATGTTTACAGGGGAGCAGAAAACACTAGACATGATATACAAGCAAGCTCCTCGGGAACTTTTGCAGTTGATGTCACCATTGAATCCAATACCTTCACAATTGAGGTATCTTCAGTACATATCAAGAAGAAATGTTGGTTCAGAATGGCCTCCTCTAGACAGGGCACTTACATTGGACTGTGTAATTATAAGAGTCATTCCTAATATGGATGGAGAAGGTGGATGCCGTCCTATATTTAGGATATATGGACAGGACCCTTTTATTCCTGCTGATCGGACTCCCAAAGTTCTCTTTTCAACTCCAAAAAAGAGCAAACTTGTTCGGCATTACAAGCAGGCTGATTGTGAACTTGTTAAGATTGACATCCATTGTCATGTTCAAGGCGATGTTGTTCTTGAGTGTATTAGTGTGGACAGTGATTTGGAACGTGAACAAATGATGTTCCGTGTGATGTTTAATACAGCATTCATAAGATCAAATATTTTGATGCTTAACCGTGATGAAATTGACATGTTATGGAATGCTAAAGATCACTTCCCTAAAAATTTTAGAGTTGAGATTCTTTTCTCAGATATGGAAGCTTCGTCTTCTGTTATTTCAATTGATCTGCCTCGTATCGAAGAGAAAGAAGGCCTACCTGTTGAAGCATTTGCTAAGGTCAAGGAAATTTTCAGCCATGTTGACTGGCTAGAGTCAAAGACAGAGGTAGCAAATGCGCTCCAACAGATCACAGCATCAAATATCCTTCTGGAAAAATTGGACGGTGGGATTTCTCCTAAAACAAGCAGCTTGCTGAAGAAGTCATTCTCTGGAACATCAATATTTGATTTAAAGACACAAAATGATACAAAGAGTCTGACTTCTGCAGTTCCGGGGAAACTTTCTTCATCCTCACCAGAATCATCTGGGGATGCTCCTATGGAAAAGATAGAACCATTAGAATCAAAGGCATTGTCAGAAAACAACGATACTCGTGCTATTTTTGGTCAGGGAAAGCAACCTGAATCATTTGGGCTCTCAACAGATTTGGATTCTACTAAAAAGGAGACTGAATCATTAGAATCAACTGGGGATGCTCCAATGGAAAAGAAGAAAGAACCTTTAGAATCAAAGGCATCACCAGAAAGTAACATCAAGACTCTTGCACCTATGGGTCAGGAGAAACAACCTATTCCCTCATCTGGACGCTCAACAGATTCAAATTCTACTGAAGTGCAGAATGAATCATTAGAATCAAAGGCATTGGTGGAAAATGATAGCAAATTTCCAACATCTATGGCTCAGGGGAAACAGTCTATTCCCTTAACTGAACCATCCATGCATACAAATTTACTGAAACAGAAGGTGGGACAATTAGAGTCAAAGGAAAAGAATATTAAATCATTAGAATCAAAGTCATTGTTGGACTATGATACCAAGTGTCCTCCATCTGTGGCTCAGGGGGAACAATCTATTCCCTTAACTCAACCGTCCATGGATGCAAATTCAATGAAAAAGAAGATTGGACAATCAGAGTCAATGGTATTGTCAGAAAATGATATCAAGAGTCTCGCTTCCACAGTTCAGAGGAAACAAAGTAGTCCCTTGCTCGCACCATCCATTGATGCTAACTCAATTAAAAAGCCGATTGAACCTCAAGAATTGCAGGTTGCTCTTCAGCTACCTACCCAATCTAAAATTATTTCTCCACGGGTGCATCAAGCTGTTCGATCTGCTCCATCTTCTTATTCTAACTCCTTTCTAGGTTCACCTAAAGCTATCTCAAGATATCATAGTGCACCATCAGCTCTTGGAATAACAACTGTGTTGCAGGACCATAAACCAATGGATATCAAAGAAGAAGTCACTCATTCAGTGACAAAATCTCCTTCTCCTTCTACTTTGCCTCCTTCAGACTCAAAGGTGCCAAAATCCATGGAGCCTAGTTCTACAAGTGTTCCTCCAGCATCATCACCGGCATCACTTCCATCTATGCCATTAAAATCTTCAGTGGATGCTCCTGCTGTTGTGGAGAAGACTTCTGGAACCCTTGCTCCTGCTCCTGCTCCTCATCCACCTGCACCTTCTCAATTTGAGCCCACTTCAAAATTGGTGCAATCTGTTGTTACACAGCACCCTGAAAATACAATGCATGATAAAGGTCAGAAATCATTGGTTACTCCTCCTCCACCCCTTTCTTCTCCATCTTCTGCCATGAACAGCTCATCCTTATCCCATCCGTCATCCTCTTCCCTTCCTGAAACATCTCTCTCCACCGTCAAAGATTCATTTAAAGGTCCTCCTCCCCCACCTCCGCCTCCACCTTCAACTGGACAGACTTCATCATCTTCAATACCTTCTCCTCCTCCTCCTCCTCCACTGTCTGCGTTTCCGTCTTCAGCTTCCCGTCCTCCTACATTGTCAGTGCCTCCTCCACCCCCTCCTCCTGCTTCTCCGTTTAGTATGAACAAGTCTACTGCTATGCCTGGTCCTCCTCCCCCACCTCCACCTCCTAGCCATGCTAGTACCACACCTGGTTCTACTCCTGCGCCATTAGTGCCACCACCTCCACCTCCTGGACATTCTGGCATCACACCTGGTTCTACTCCTACACCATCAATGCCACCACCACCCCCTCCTCCTGCTTCTCCGTTGAGTATGAGCAAGTCTGCTGCTATGTCTGGCCCTCCTCCCCCACCTCCACCTCCTGGAAATTCTAGCACCATACCTGGTTCTACTCCTACACCATCAGTGCCACCACCCCCACCCCCTCCTCTTGCTTCTCCATCTGGAAATTCTTTGTCTAAGAACTCTGCAAATGTTCCACCTGTACCACCACCTCCTTCCCCTGCTGGCAACGGATTATCGAAACCTGGCACTGCCTCACCACAGTCTCATGCTGGTGTTGGAAATGGAAATGTGCCTCCAGTTCCTGGACCACCTTCTGGTGGTCCACTTGGTGCTAAGGGACGTGGCTTATTGCGAGCTAATCCAAAGTCTCAAACTAAAAGGAGCAATCTGAAACCTTACCATTGGTTGAAATTAACAAGGGCCATGCAAGGTAGCCTATGGGCTGAGACACAGAAACTTGATGAATATTCTAGGGCTCCAGAGTTTGACATGTCAGAACTTGAGAGTCTTTTCTCTGCGGTTGCTCCAAAGTCTGATCATGAAAAAGGAGGAAAATCAAATCGCCGTGCCGCGGGGCAAAAAGCTGATAGAGTTCAATTGATTGAGCTCAGGCGGGCATATAACTGTGAGATCATGCTTACAAAAGTCAAAATTCCTTTGTCTGATTTAATGGGTGCTGTGCTTGCATTGGACGATTCAGTATTACATGCTGATCAAGTTGAGAACCTCATAAAGTTCTGTCCAACCAAAGAAGAGATAGAACTGCTCAAGGGCTATAATGGAGATAAGGAAAACTTGGGGAAGTGTGAACAGTTCTTCTTAGAATTAATGAAAGTCCCAAGAGTGGAAAGCAAGCTAAGGGTTTTCTCTTTTAAGATGCAATTCTACTCCCAGGTTTCCGAGCTCAGAAGGGACTTGAATATTGTTAATTCTGCATCTGAAGAGATCAGGAATTCAGTCAAGTTGAAAAGAATCATGCAGACCATTCTTTCTCTGGGTAATGCTTTGAACCATGGAACTGCAAGAGGTTCTGCTGTTGGGTTCCGATTGGATAGTCTCCTTAAACTCACTGATACACGAGCCCGAAACAACAAGATGACTCTTATGCATTATCTTTGTAAGGTGCTTGCTGAAAAGCTTCCAGAACTTTTAGATTTCCACAAAGACCTAGCAAGTTTGGAGGCTGCAACCAAGATACAATTGAAATTTTTGGCAGAGGAAATGCAAGCTATTAGTAAAGGACTGGAGAAAGTAATCCAGGAATTGACTGCATCAGAGAATGATGGGCCTGTGTCAGAAAACTTCTGCCAGATTCTGAAGGAATTCCTTTCTGATGCTGAAGCTGAAGTGAGGTCTTTGGCTCAACTTTATGCCAATGTGGGTAGAAATGCAGATGCATTGGCTCTATACTTTGGAGAAGATCCGGCACGTTGCCCATTTGAACAAGTTGTATCTACTCTGCTCAACTTTTCGAAGATGTTCGTCAAAGCACATGATGAAAATTGCAAGCAGCTTGAATATGAAAAAAAGAAAGCGGAGAAGGAAGCAGAAAAAGAGAAGTTGAAGCTAGCTGCTACAAAGGAGCCTGAACATATGATAAGGACCACCATCAAGAGTGGAAGTAAATAA 4677 0.4321 MALFRKFFYKKPPEGLLEITERVYVFDYCFTTDVMEEDEYKVYIGGIIGQLLDHFPDASFMVFNMREGQHQSQISNILCDYDMTVMDYPRQYEGCPLLTMEMIHHFLRSGENWLQLGQQNVVLMHCERGGWPVLAFMVAALLIYRKMFTGEQKTLDMIYKQAPRELLQLMSPLNPIPSQLRYLQYISRRNVGSEWPPLDRALTLDCVIIRVIPNMDGEGGCRPIFRIYGQDPFIPADRTPKVLFSTPKKSKLVRHYKQADCELVKIDIHCHVQGDVVLECISVDSDLEREQMMFRVMFNTAFIRSNILMLNRDEIDMLWNAKDHFPKNFRVEILFSDMEASSSVISIDLPRIEEKEGLPVEAFAKVKEIFSHVDWLESKTEVANALQQITASNILLEKLDGGISPKTSSLLKKSFSGTSIFDLKTQNDTKSLTSAVPGKLSSSSPESSGDAPMEKIEPLESKALSENNDTRAIFGQGKQPESFGLSTDLDSTKKETESLESTGDAPMEKKKEPLESKASPESNIKTLAPMGQEKQPIPSSGRSTDSNSTEVQNESLESKALVENDSKFPTSMAQGKQSIPLTEPSMHTNLLKQKVGQLESKEKNIKSLESKSLLDYDTKCPPSVAQGEQSIPLTQPSMDANSMKKKIGQSESMVLSENDIKSLASTVQRKQSSPLLAPSIDANSIKKPIEPQELQVALQLPTQSKIISPRVHQAVRSAPSSYSNSFLGSPKAISRYHSAPSALGITTVLQDHKPMDIKEEVTHSVTKSPSPSTLPPSDSKVPKSMEPSSTSVPPASSPASLPSMPLKSSVDAPAVVEKTSGTLAPAPAPHPPAPSQFEPTSKLVQSVVTQHPENTMHDKGQKSLVTPPPPLSSPSSAMNSSSLSHPSSSSLPETSLSTVKDSFKGPPPPPPPPPSTGQTSSSSIPSPPPPPPLSAFPSSASRPPTLSVPPPPPPPASPFSMNKSTAMPGPPPPPPPPSHASTTPGSTPAPLVPPPPPPGHSGITPGSTPTPSMPPPPPPPASPLSMSKSAAMSGPPPPPPPPGNSSTIPGSTPTPSVPPPPPPPLASPSGNSLSKNSANVPPVPPPPSPAGNGLSKPGTASPQSHAGVGNGNVPPVPGPPSGGPLGAKGRGLLRANPKSQTKRSNLKPYHWLKLTRAMQGSLWAETQKLDEYSRAPEFDMSELESLFSAVAPKSDHEKGGKSNRRAAGQKADRVQLIELRRAYNCEIMLTKVKIPLSDLMGAVLALDDSVLHADQVENLIKFCPTKEEIELLKGYNGDKENLGKCEQFFLELMKVPRVESKLRVFSFKMQFYSQVSELRRDLNIVNSASEEIRNSVKLKRIMQTILSLGNALNHGTARGSAVGFRLDSLLKLTDTRARNNKMTLMHYLCKVLAEKLPELLDFHKDLASLEAATKIQLKFLAEEMQAISKGLEKVIQELTASENDGPVSENFCQILKEFLSDAEAEVRSLAQLYANVGRNADALALYFGEDPARCPFEQVVSTLLNFSKMFVKAHDENCKQLEYEKKKAEKEAEKEKLKLAATKEPEHMIRTTIKSGSK* 1559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01973 1558 Gene3D Formin, FH2 domain 1155 1548 IPR042201 -
Rops9g01973 1558 MobiDBLite consensus disorder prediction 764 804 - -
Rops9g01973 1558 MobiDBLite consensus disorder prediction 838 854 - -
Rops9g01973 1558 Coils Coil 1511 1543 - -
Rops9g01973 1558 MobiDBLite consensus disorder prediction 1032 1068 - -
Rops9g01973 1558 MobiDBLite consensus disorder prediction 488 518 - -
Rops9g01973 1558 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 338 IPR035892 -
Rops9g01973 1558 SMART PTEN_C2_2 197 337 IPR014020 -
Rops9g01973 1558 MobiDBLite consensus disorder prediction 615 652 - -
Rops9g01973 1558 MobiDBLite consensus disorder prediction 875 901 - -
Rops9g01973 1558 MobiDBLite consensus disorder prediction 536 586 - -
Rops9g01973 1558 Pfam Formin Homology 2 Domain 1138 1510 IPR015425 -
Rops9g01973 1558 SMART it6_source 794 1557 IPR015425 -
Rops9g01973 1558 MobiDBLite consensus disorder prediction 432 449 - -
Rops9g01973 1558 MobiDBLite consensus disorder prediction 903 1024 - -
Rops9g01973 1558 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 187 IPR029021 -
Rops9g01973 1558 MobiDBLite consensus disorder prediction 432 453 - -
Rops9g01973 1558 Pfam C2 domain of PTEN tumour-suppressor protein 200 336 IPR014020 -
Rops9g01973 1558 MobiDBLite consensus disorder prediction 757 1147 - -
Rops9g01973 1558 MobiDBLite consensus disorder prediction 623 652 - -
Rops9g01973 1558 Gene3D Protein tyrosine phosphatase superfamily 10 191 IPR029021 -
Rops9g01973 1558 Gene3D - 196 341 - -
Rops9g01973 1558 MobiDBLite consensus disorder prediction 474 586 - -
Rops9g01973 1558 ProSiteProfiles C2 tensin-type domain profile. 199 338 IPR014020 -
Rops9g01973 1558 PANTHER FORMIN-J 1 1544 - -
Rops9g01973 1558 MobiDBLite consensus disorder prediction 1094 1108 - -
Rops9g01973 1558 Coils Coil 591 611 - -
Rops9g01973 1558 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1136 1536 IPR015425 -
Rops9g01973 1558 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1213 1537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01973 Rops-Chr9 36465292 36477918 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01973 645 752 FH2 protein (formin) Gene Family AT2G25050 36.937 1.10e-09 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01973 - - gmx:100791023 1199.11