Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01968 ATGGCTGGTTCTTCAACAACTATCACCTCAGCTTCTTCTTTTTTGCTTCTATTTTTTCTCTTTGGCTTTGTTTCAGCTAATGAAGTCTTGGTTGGAGGCAAAACAGATGCATGGAAGATTCCATCTTCTGAATCAGATTCTCTCAATGAATGGTCAAAAAGGGCTCGGTTCCAAGTTGGTGACCATCTTGTTTGGAAATATGATGGTGGGAAAGATTCTGTTTTGCAAGTGAGTGAGGAGGATTATGCTAAATGCAAAACCTCAAACCCCATCAAAGAGTACAATGATGGGAACACAAAGGTGAGGCTTGACCATCCAGGGCCACATTACTTCATTAGTGGAGCAAAGGGTCATTGTGAAAAGGGTCAAAAGCTTATTGTGGTGGTTATAACTCCAAGGGGAAGGTACATTGGTATTTCTCCTTTTGCTTCACCAGCACCTTCTCCATCATCAGAGCTTGAAGGTCCAGCTGTTGCTCGTACTAGTAGTGCCTCAGCTTTGAAGGGTGGGATTGTGATGGTGGCTTTGGGAGTACTTGCTATGTGGGTTTTTTAA 555 0.4288 MAGSSTTITSASSFLLLFFLFGFVSANEVLVGGKTDAWKIPSSESDSLNEWSKRARFQVGDHLVWKYDGGKDSVLQVSEEDYAKCKTSNPIKEYNDGNTKVRLDHPGPHYFISGAKGHCEKGQKLIVVVITPRGRYIGISPFASPAPSPSSELEGPAVARTSSASALKGGIVMVALGVLAMWVF* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01968 184 Gene3D - 25 132 IPR008972 -
Rops9g01968 184 ProSiteProfiles Phytocyanin domain profile. 28 131 IPR003245 GO:0009055
Rops9g01968 184 SUPERFAMILY Cupredoxins 26 130 IPR008972 -
Rops9g01968 184 FunFam Early nodulin-like protein 1 26 134 - -
Rops9g01968 184 Pfam Plastocyanin-like domain 38 123 IPR003245 GO:0009055
Rops9g01968 184 CDD OsENODL1_like 28 130 IPR041846 -
Rops9g01968 184 PANTHER BLUE COPPER PROTEIN 28 151 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01968 Rops-Chr9 36368138 36369353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01968 1 184 Phytocyanin Superfamily AT4G31840 55.676 3.69e-64 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01968 - - gmx:100527857 255.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01968 9 36368138 36369353 Rops9g01968 9 36368138 36369353 ECH
Rops9g01968 9 36368138 36369353 Rops10g01342 10 26140051 26140849 PCT