Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01964 ATGGGAACAAATCTCAGCATTCCGAAAACTGAAAAGTTTTCTGAAGATGGTGAAAATGACCATCTTAGATATGGCTTGTCATCTATGCAAGGCTGGCGCGCAACAATGGAAGATGCACATGCTGCACATCTTGATCTGGATGCATCCAGTTCGTTTTTTGGTGTTTATGATGGTCATGGAGGTAAGGTGGTTGCAAAGTTTTGTGCCAAGTATCTTCACCAACAGGTGCTCAGGAGTGAAGCATACATGGCTGGAGATGTTGGAGTCTCTCTTCAGAAAGCATTTTTCAGAATGGATGAGATGATGCGTGGTCAAAGGGGATGGAGGGAATTAGCAGTCTTGGGTGATAAGTTAAACAAGTTTAATGGAATGATAGAAGGAATGATTTGGTCTCCACGAAGCAGTAATGGTAAGGACCAAGGTGAAGGTTGGGCCTTTGAGGAGGGGCCTCATTCTGATTTTGCTGGACCAACTTCAGGAAGCACTGCCTGCGTTGCAATTATTAGAAACAATGAACTTTTTGTTGCAAATGCTGGTGATTCACGTTGTGTAATATCTAGGAAGGGTCAGGCATACAATTTGACTAGAGACCACAAACCTGATCTTGAGATTGAGAAGGACAGAATCTTACAAGCTGGTGGTTTCATTCATGCAGGACGAGTTAATGGGAGTTTAAATCTTGCAAGAGCTATAGGTGACATGGAATTTAAGCAGAATAGATTTCTTTCTGCAGAAAAACAAATTGTGACCGCCAATCCGGATATAAACATTGTTGACGTTCGTGATGAAGACGAATTTATAGTGCTAGCTTGTGATGGCATATGGGATTGCATGTCAAGCCAACAATTGGTAGATTTTGTACGTCAACAACTGCTCTTGGAAACCAAACTTTCTGCGGTTTGTGAAAGAGTACTAGACCGGTGTTTGGCACCATCGATTGCTGTTGGTGAGGGATGTGATAACATGACCATGATTTTGGTGCAGTTCAAAAAACCACTGCAGTCCAGTGCACCAGCTCAAGAGCAATCCTCCAAATGA 1038 0.4268 MGTNLSIPKTEKFSEDGENDHLRYGLSSMQGWRATMEDAHAAHLDLDASSSFFGVYDGHGGKVVAKFCAKYLHQQVLRSEAYMAGDVGVSLQKAFFRMDEMMRGQRGWRELAVLGDKLNKFNGMIEGMIWSPRSSNGKDQGEGWAFEEGPHSDFAGPTSGSTACVAIIRNNELFVANAGDSRCVISRKGQAYNLTRDHKPDLEIEKDRILQAGGFIHAGRVNGSLNLARAIGDMEFKQNRFLSAEKQIVTANPDINIVDVRDEDEFIVLACDGIWDCMSSQQLVDFVRQQLLLETKLSAVCERVLDRCLAPSIAVGEGCDNMTMILVQFKKPLQSSAPAQEQSSK* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01964 345 SMART PP2C_4 12 327 IPR001932 -
Rops9g01964 345 ProSiteProfiles PPM-type phosphatase domain profile. 23 329 IPR001932 -
Rops9g01964 345 PANTHER PROTEIN PHOSPHATASE 2C 20 328 IPR015655 GO:0004722|GO:0006470
Rops9g01964 345 SUPERFAMILY PP2C-like 4 330 IPR036457 -
Rops9g01964 345 CDD PP2Cc 23 329 IPR001932 -
Rops9g01964 345 Pfam Protein phosphatase 2C 157 311 IPR001932 -
Rops9g01964 345 Pfam Protein phosphatase 2C 23 103 IPR001932 -
Rops9g01964 345 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Rops9g01964 345 Gene3D - 1 330 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01964 Rops-Chr9 36262032 36269272 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01964 1 341 PP2C-type Phosphatase Gene Family AT2G25070 75.660 0.0 565
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01964 K17499 - gmx:100793667 601.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01964 9 36262032 36269272 Rops9g01964 9 36262032 36269272 ECH
Rops9g01964 9 36262032 36269272 Rops10g01339 10 26115595 26124571 PCT