Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01947 ATGGCTGCACGACATGAGAATGATCCTAGCAGCATAGTTTCAGTTTCAAGGATTGTATCTGTGCATCCCAAACTTTTACAACCTCAGAGGGTTTTGAACCTTTCCAATTTGGATAGACAGTGTCCCACGCTTATGCACTTGGTGTTCTTTTATAACCTATCATCATCTCACCAAACATTGAATGATTTGTCCCTCAATTCAGTGTTCTCCAGCTTGAAATCTGGCTTGGAAGAGACCTTGACTCTTTGGTATCCAGGTGCAGGTAGGTTGAGCTCAAACCAAAGTGATGGCAAGCTCAACCTTTGGTGCAAAAACCAGGGTGCAGTTCTTGCAGAAGCTGAAACTACTGTTAAAATCTCACAACTTGGAGACCTCTCTCAGTACAATGAATTCTTTGAGAAACTGGTTTATAAGCCAGCTTTTGATGGGAATTTCTCAAACATGCCTCTGATTGTTGCTCAGGTTACAAAATTTGGTTGTGGAGGGTATTCAATAGGTATAGGAACAAGTCACTCATTATTTGACGGGCCAGCAACCTATGATTTCCTGTGTGCATGGGCTTCAAATTCTGAAATTGTGAAAGGAAGGAGATCTAATGAGGTGCCAAAACCAGTGCATGAGAGAGGGATCCTCCTAAGTGGTGGTCATCAAACCCCAAGAGGGACTATAAATTTTCCTTCAGCATCAAGCTTAAATGCTCAACAAGCAAGGGCCACAGCAATAGATCATCTATATCAACTTATAATGCAAGTAGCTAGTGGACAAAAGGGCTTTCCTCTGCAAATTGGAGTCTCTGATCAAAAGAAGTTGGTTCTTAAAACCTATCATCTATCTGGTGCAATGATAGATGACTTGAAAAGAAAACACTTCCTCATGAGGAGAGGTTCTCTTCCATTCTCAACCTTTGAGGTTCTTGCGGCTCACCTATGGAAGGCGAGGACCAAAGCTTTAGGACTGAGGAAAGAAAAGCTGGTATGCCTGCAATTCGCAGTGGACACAAGGAACAAGATGTTGCCCCCATTGCCAAAAGGTTTCAGTGGAAACGCTTATGTTCTTGCCTCAGTTATGATGTCAGTAGGAGAACTTGAACAAACAAGCCATGAAGGCATCATTGAGAAAATAAGAGAAGCCAAGAACACAGTGAATCAGGACTATGTGAAAGCCTACATTGATGCATTGGAAGGACCACAAGCTTCTTCTCTCCCTCCATTGAAGGAGTTAACTTTGGTTTCTGATTGGACAAGAATGCCATTTCATAACATTGAGTTCTTTCATGGAAAAGCAGCCTATGCTTGTCCTCTTGCCACTCCAATTCCACAGGTTGCATATTTCATGCAGAATCCTACTGATAACCGTGGCGTTGACTTGAGAATTGGTTTTGAGGCAGAAAACATAAGTGCTTTTACTAACTGCTTTTCAAGCATAGAGCAGTAA 1434 0.4212 MAARHENDPSSIVSVSRIVSVHPKLLQPQRVLNLSNLDRQCPTLMHLVFFYNLSSSHQTLNDLSLNSVFSSLKSGLEETLTLWYPGAGRLSSNQSDGKLNLWCKNQGAVLAEAETTVKISQLGDLSQYNEFFEKLVYKPAFDGNFSNMPLIVAQVTKFGCGGYSIGIGTSHSLFDGPATYDFLCAWASNSEIVKGRRSNEVPKPVHERGILLSGGHQTPRGTINFPSASSLNAQQARATAIDHLYQLIMQVASGQKGFPLQIGVSDQKKLVLKTYHLSGAMIDDLKRKHFLMRRGSLPFSTFEVLAAHLWKARTKALGLRKEKLVCLQFAVDTRNKMLPPLPKGFSGNAYVLASVMMSVGELEQTSHEGIIEKIREAKNTVNQDYVKAYIDALEGPQASSLPPLKELTLVSDWTRMPFHNIEFFHGKAAYACPLATPIPQVAYFMQNPTDNRGVDLRIGFEAENISAFTNCFSSIEQ* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01947 477 Pfam Transferase family 20 472 - -
Rops9g01947 477 Gene3D - 10 227 IPR023213 -
Rops9g01947 477 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 21 430 - -
Rops9g01947 477 Gene3D - 261 475 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01947 Rops-Chr9 35788855 35791873 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01947 13 468 Monolignol Biosynthesis Gene Families AT5G48930 23.340 3.19e-32 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01947 K15400 - gmx:100803347 788.104