Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01945 ATGGATGATCCTGAAGACCAGTTTCCTGTAGGAATGCGTGTTCTTGCAGTCGATGATGACCCACTATGCCTCAAGATTTTGGAGGCTCTGCTTCGAAGGTGTCAATTCCATGTAACGGTGGCTAAAAATGTAATAGCGGCACTGAAGTTGTTGAGAGAAAACAAAAACAAGTTTGATCTGGTAATCAGTGATGTCCACATGCCAGACATGGATGGATTCAAGCTGCTTGAGCTTGTGGGACTTGAGATGAACCTACCTGTCATAATGTTGTCTGTGAATGGTGACCCCGAGATGGTGATGAAGGGAATTACTCATGGAGCTTGTGATTATCTGCTGAAACCTGTTAGAATTGAGGAGCTACAAAACATTTGGCAGCATGTAATAAGGAGGAAGAAGATTGACTCAAAGGAGAAGAACAAAACCGGCAACCAAGACACACCTAATTCTGATAGCTGCAATGGAAGAGTGTCAGCAGCAACAGCTAGCTTGGATACCGATTAG 501 0.4391 MDDPEDQFPVGMRVLAVDDDPLCLKILEALLRRCQFHVTVAKNVIAALKLLRENKNKFDLVISDVHMPDMDGFKLLELVGLEMNLPVIMLSVNGDPEMVMKGITHGACDYLLKPVRIEELQNIWQHVIRRKKIDSKEKNKTGNQDTPNSDSCNGRVSAATASLDTD* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01945 166 Pfam Response regulator receiver domain 14 122 IPR001789 GO:0000160
Rops9g01945 166 CDD REC_typeB_ARR-like 14 128 - -
Rops9g01945 166 ProSiteProfiles Response regulatory domain profile. 13 128 IPR001789 GO:0000160
Rops9g01945 166 MobiDBLite consensus disorder prediction 144 166 - -
Rops9g01945 166 Gene3D - 12 164 - -
Rops9g01945 166 SMART REC_2 12 124 IPR001789 GO:0000160
Rops9g01945 166 PANTHER TWO-COMPONENT RESPONSE REGULATOR 12 143 IPR045279 GO:0009736
Rops9g01945 166 MobiDBLite consensus disorder prediction 135 166 - -
Rops9g01945 166 SUPERFAMILY CheY-like 11 135 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01945 Rops-Chr9 35750954 35752876 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01945 6 155 Response Regulator Gene Family AT2G25180 69.427 1.01e-71 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Rops9g01945 Response_reg 5.3e-25 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01945 - K14491 gmx:100803879 275.404