Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01937 ATGAAAATGAAGCTTCTTTTTATGCTTCTCATGCTCCTCCTCCTTATTCTTCACAAACCCATTTGGATTCTTGCTTCATCAGACCCTCTTGTTTCCTCACCTGAAGTTTCACCCTTTTCTTCAATTTCCACATCAATGGCTGCTTCCTCACCAGGTATTCTTGCAGGGGAGGAACAGAAAAAAATAGATTCACACAAGAAAATGGTAATAGCTCTTGCTGTTGCCAGCACATCACTTGGTGCAGTCATTTTGTGTGTGTTATGCTTCTGGATTTATTACACCAAGTACCCTTCAAAACCCAAAAGGAAAAATGTTCAAAGTGCAGATGCTGAGAAAGGACTTGCTTTGAGCAAATTTAGTTCTGTGAAGATGGTTGGTAAGAAAGGGTGTGTTCCCATGATTGATTACAAGCAAATAGAAAAAGCCACTGGAAATTTCAGTGAATGTAACATCTTGGGTGAGGGTGGTTTTGGATGTGTTTACAAGGCTCAGTTGGATGATAACTTGGATGTTGCTGTCAAGAAACTGCACTGTGAAAGAAGTCACTATGCTGAGAGAGAATTTGAGAATGAGGTGGATTTGTTAAGTAAAATCCAACATCCAAATGTAATTTCGCTACTGGGTTGTAGCAGTAATGAAGACACGAGGTTTATTGTCTATGAGTTGATGCAAAATGGATCATTGGAAACTCAATTACATGGACCTTCTCATGGCTCAGCATTGACTTGGCATATGAGGATGAAGATTGCTCTTGACATAGCAAGGGGTTTAAAACATCTGCATGAGCACTGTTACCCTCCAGTGATCCATAGAGATCTGAAATCTTCTAATATTCTTTTAGATGCAAACTTCAATGCCAAGCTTTCTGATTTTGGTCTTGCCATAACTGATGGGTCCCAAAACAAGAATAACCTCAAGCTTTCAGGAACCTTGGGGTACGTAGCCCCAGAGTATCTTTTAGATGGTAAATTGACTGATAAAAGTGATGTGTATGCTTTTGGAGTTGTGCTTCTGGAGCTGCTATTAGGAAAGAAGCCAGTGGAAAAACTTGCACCAGCTCAATGCCAATCTATTGTCACATGGGCCATGCCACAGCTCACAGACAGATCCAAGCTTCCAACTATTGTAGATCCTGTGATTAAGGATACAATGGATCCCAAGCACTTATACCAGGTTGCTGCTGTGGCTGTGCTATGTGTGCAACCAGAGCCATGTTACCGGCCACTGATTGCAGATGTTCTCCACTCACTCATCCCTCTTGTACCTGTTGAGCTTGGAGGAACACTGAGAGTTTCACAAGTGACACAAGTTTTGCCTGCTGATCCACCTGTGAATTCTAGTCAATGA 1347 0.4165 MKMKLLFMLLMLLLLILHKPIWILASSDPLVSSPEVSPFSSISTSMAASSPGILAGEEQKKIDSHKKMVIALAVASTSLGAVILCVLCFWIYYTKYPSKPKRKNVQSADAEKGLALSKFSSVKMVGKKGCVPMIDYKQIEKATGNFSECNILGEGGFGCVYKAQLDDNLDVAVKKLHCERSHYAEREFENEVDLLSKIQHPNVISLLGCSSNEDTRFIVYELMQNGSLETQLHGPSHGSALTWHMRMKIALDIARGLKHLHEHCYPPVIHRDLKSSNILLDANFNAKLSDFGLAITDGSQNKNNLKLSGTLGYVAPEYLLDGKLTDKSDVYAFGVVLLELLLGKKPVEKLAPAQCQSIVTWAMPQLTDRSKLPTIVDPVIKDTMDPKHLYQVAAVAVLCVQPEPCYRPLIADVLHSLIPLVPVELGGTLRVSQVTQVLPADPPVNSSQ* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01937 448 ProSiteProfiles Protein kinase domain profile. 146 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01937 448 CDD STKc_IRAK 152 420 - -
Rops9g01937 448 FunFam Protein kinase superfamily protein 113 222 - -
Rops9g01937 448 Pfam Protein tyrosine and serine/threonine kinase 150 382 IPR001245 GO:0004672|GO:0006468
Rops9g01937 448 ProSitePatterns Protein kinases ATP-binding region signature. 152 175 IPR017441 GO:0005524
Rops9g01937 448 FunFam probable receptor-like protein kinase At1g80640 223 422 - -
Rops9g01937 448 SUPERFAMILY Protein kinase-like (PK-like) 127 417 IPR011009 -
Rops9g01937 448 Gene3D Transferase(Phosphotransferase) domain 1 223 422 - -
Rops9g01937 448 SMART serkin_6 146 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01937 448 Gene3D Phosphorylase Kinase; domain 1 105 222 - -
Rops9g01937 448 ProSitePatterns Serine/Threonine protein kinases active-site signature. 268 280 IPR008271 GO:0004672|GO:0006468
Rops9g01937 448 PANTHER OS01G0750732 PROTEIN 53 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01937 Rops-Chr9 35543576 35547272 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01937 20 363 Receptor kinase-like Gene Family AT1G80640 49.311 7.85e-101 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Rops9g01937 PK_Tyr_Ser-Thr 4.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01937 - - gmx:100785380 733.406