Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01916 ATGTTTGGCCAAAAATATGGTGTAAAAGGGGAAGACTCAAAGCTGCAAGCCATCTCCAAAGCCATCAGAGTGGTGCCTCACTTCCCTAAACAAGGAATAATGTTTCAAGACATCACAACATTGTTGTTGGATCACAAGGCATTTCAAGATACGATTGACATTTTTGTCGATCGTTATAGAGACATGAACATTTCTGTTGTTGCCGGAGTTGAAGCCAGGGGATTCATTTTTGGTTCCTCAGTTGCGTTAGGCATTGGTGCCAAATTTGTTCCTTTACGCAAACCAGGAAAGCTACCAGGTGAAGTGATATCAGAAAAATATGATCTGGAATATGGAACTGATTGTTTAGAGATGCATGTTGGTGCTGTCCATCCCTGTGAACGGGTCATTGTTGTTGATGATTTGGTGGCTACAGGTGGAACTCTGTCAGCAGCAATAAGACTTCTAGAACGTGTTGGTGCTGAAGTAGTGGAATGTGCTTGTGTGATTGGTCAGCCTGATCTTAAGGGACATTGCAGGCTTAATGGAAAGCCACTTTATATCCTTGTGGAGCCACGTCAAGTAGAAAATGGTTTCTGA 579 0.4266 MFGQKYGVKGEDSKLQAISKAIRVVPHFPKQGIMFQDITTLLLDHKAFQDTIDIFVDRYRDMNISVVAGVEARGFIFGSSVALGIGAKFVPLRKPGKLPGEVISEKYDLEYGTDCLEMHVGAVHPCERVIVVDDLVATGGTLSAAIRLLERVGAEVVECACVIGQPDLKGHCRLNGKPLYILVEPRQVENGF* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01916 192 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 9 186 - -
Rops9g01916 192 SUPERFAMILY PRTase-like 20 177 IPR029057 -
Rops9g01916 192 NCBIfam adenine phosphoribosyltransferase 19 183 IPR005764 GO:0003999|GO:0005737|GO:0006168
Rops9g01916 192 Hamap Adenine phosphoribosyltransferase [apt]. 18 185 IPR005764 GO:0003999|GO:0005737|GO:0006168
Rops9g01916 192 FunFam Adenine phosphoribosyltransferase 1 7 185 - -
Rops9g01916 192 Pfam Phosphoribosyl transferase domain 44 169 IPR000836 -
Rops9g01916 192 CDD PRTases_typeI 52 184 IPR000836 -
Rops9g01916 192 Gene3D - 6 185 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01916 Rops-Chr9 34941252 34944935 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01916 11 184 PRT Gene Family AT1G27450 68.966 2.85e-87 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01916 K00759 - gmx:100775389 320.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01916 9 34941252 34944935 Rops9g01916 9 34941252 34944935 ECH
Rops10g01393 10 26897203 26900959 Rops9g01916 9 34941252 34944935 ECH
Rops9g01916 9 34941252 34944935 Rops10g01393 10 26897203 26900959 PCT