Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01892 ATGATGATGAATTCTCCAGAACCTTCCAAGATCAAGAGTAGTTCTTCTGCATCTGTACTCAATGCAAACATCACCAATACTCCTACATCTGAATCTCCTCAAGTTCAAGAATCCCCCTTTTCAACATTTGCCGACAGTTTATCTCCGATAAACACTGTAAAGGCTTGTCATGTGCCACAAGGTTTTCTTGGACTCAGTTCTCCACCTCTTGTATTCAAGTCACCTCGTATCAGTTGTCACCGTGAAACACAGTTCTTGGAAAGGTCTCAAGGCACTCGGTTATCCAGTGCAGAAACATCTCAAAGTGACAATGGAGACAACAGTCTTCTTGAAGCTCCCGGTGATCCCAGGAAATCAAATTTTCGACAGCCATTGCAAGAGAGGTTTATAATTGTCCCTCTGAAGGATTCTGACATAAAAAATGATGCAAATACCCAAAACTGCAGTCCTCCACCGTCTGTCGATGAATATTTAGCTGATCCTGGGGATATTGATCAAATGTATTCGGTCAACCCAGATGTGGAACAATCTACTGATGCAGTTGAATCAAGTGACATGACTCAGTCAAAGAAAATTTTATCAAAATTTGATAGGAAAGATGGTCCTGGTGATAAAGCAGTAGAACCTTTGTCATTGTCAGAGGAATCTAATAAGGCTCATCAAGTAAGGCACTATGTTGAAGAACCTGAAAAAATAGAAGGGGAAAAAAGAGATGTTGAATGGGCTTCTCAAGGGCACACAAAGTTAGAGTCCAGTTTAGCTGCAGATGTTTTTGATCAACAATATAGTCATGATTCACTTCCCCAGTGCACAGGAAATGAACAACGGGATCATGGAGATTGTGCACCCCAATCAATGCCTGATTCTCTGCAGGATGTTAAAGAATGTGAAGATTACAATGAGATGGTGTCAACCTCACATGTAGGTGCAGAGAATATCTCGCAAGATGGTTCCGAGGCTAGTCTAAAGTACCATGGCATTCGTAGACGCTGCCTACAATTTGAGGAAGCAGCTTCCAATGCTCTTGGAAGTGATAAGTCTGGTACAACTTCAAGCAAAATGAAAATGGTCAAGGTGTCCGAACCTATCACTTCCTTGTTCCCTCAACGAGGTATTGGGTTGCATTTAAATAGAATTATAAATGCAATGCCACCTGGTCGTGCTTCAACTACAGGTATGAGATTATCAGATGGTTTACAAGGGATGAAAGCCACATCTTCTATAAGTTTACATAGAGTGGAGAACATGAAGAGATCCTTAATTTCGTCAAATATGGATGGGCGAACATTAGTTGATACTAGAAATGAGAGCCATGAAACTGATGCTTCAGTAGCTGCAGATTCTTTCATCTCTGAGTCTCCTAGCTTGACAGAACTTAGTTCCTCCTATCCTGCAAATGTCCATGATAAGAGGAAACTAAGTCCTACAGATGCTGGAGATTCTGAGGAATTCAATCCACCTAGCTCCGGCAAGAAAAAGAAGAAAACATCAATCACTACCGATGACAATGGCTGTAAGCGGTGCAACTGTAAGAAGAGTAAATGTTTGAAACTTTATTGTGATTGTTTTGCCGCCGGAATCTATTGTGGCAACGCTTGTTCTTGCCAAGGCTGCTCAAATAAATCAGAATATCAAGATACGGTTCTTGAGACAAGGCAACAAATTGAATCCCGTAATCCACTTGCATTTGCTCCCAAGATTGTACAATGTACCACTGATCCATCAAATAATATGGAAGATGTAACAACGCCTTCATCAGCAAGGCACAAAAGAGGTTGCAATTGCAAGAGGTCAATGTGTCAGAAAAAATATTGCGAATGTTATCAGGCTAATGTTGGATGCTCAAGTGGATGTCGATGTGAGGGATGCAGGAATATCTATGGCAAGAAAGAAGATTATGTTGCGTCCGAACACGCTTTGAGTAAAGAAAGGGTAAACAGCAGTGTTGAAAATGGGTCAGATAGCACAATGCACAATAAACCGGAAATGGTGGCAAACAGGAAAGATTTGTCACATCACCTCTCACCTCTAACGCCATCGTTGCAATGCTCTGACCAAGGCAAGGAGGCTGCAAAAGCCAGACTTCTTTCTGGAAAATATCTATCATCCCCTGAATCTGGTGTCAATATGTTTTCTAAATCATCCATAAACTCACACTGCATTGTTGCATATGTGGAAAGGAATGAGATGTTGGGAACTGCCTCCTATGATTTGCAAATGGATGGCAACAATGTGAATGTACACGATCAATCATCACCAACATGTGATTCAGTTGCCAACGTGCTTCAGCTCACTCCTCTGTCAAATACTGAGTCAATGTCTGGTGCTTCACCTTTCTCATCTAAAGCACATGAGTGGACAGAGATTCCACCATCCCGACTCTCCTCCCGTGGATGTATTCGCCAGTTATCTGGGGGCTCTCTTCGTTGGCGCAGTTCAATCACTCCAATGACTAACATAGATGAAACACAATATTTGCAGTGTCCTGAATCAGATAACAGGCTGTTTGACATTGTAGAAGATGAAACTCCTGATGTATTGAAGGAAGCTTCCACTCCCATCAAGTCTGTGAAAGCAAATTCCCCAATCCAAAAGCGAGTTTCTCCTCCCCCAAGTCATCCACGTGGGATTGGATCAAGTTCCTCAGGAGGCTTGAGAAATGGCAGAAAATTTATATTGCAATCTGTACCTTCTTTCCCACCGTTGACCCCTTGTGCTGATTCCAAAGACAATGGCAATAAGGATTGCAGTAAGGATTCGGGTAACGGTGCCAGCAAGTGA 2781 0.4214 MMMNSPEPSKIKSSSSASVLNANITNTPTSESPQVQESPFSTFADSLSPINTVKACHVPQGFLGLSSPPLVFKSPRISCHRETQFLERSQGTRLSSAETSQSDNGDNSLLEAPGDPRKSNFRQPLQERFIIVPLKDSDIKNDANTQNCSPPPSVDEYLADPGDIDQMYSVNPDVEQSTDAVESSDMTQSKKILSKFDRKDGPGDKAVEPLSLSEESNKAHQVRHYVEEPEKIEGEKRDVEWASQGHTKLESSLAADVFDQQYSHDSLPQCTGNEQRDHGDCAPQSMPDSLQDVKECEDYNEMVSTSHVGAENISQDGSEASLKYHGIRRRCLQFEEAASNALGSDKSGTTSSKMKMVKVSEPITSLFPQRGIGLHLNRIINAMPPGRASTTGMRLSDGLQGMKATSSISLHRVENMKRSLISSNMDGRTLVDTRNESHETDASVAADSFISESPSLTELSSSYPANVHDKRKLSPTDAGDSEEFNPPSSGKKKKKTSITTDDNGCKRCNCKKSKCLKLYCDCFAAGIYCGNACSCQGCSNKSEYQDTVLETRQQIESRNPLAFAPKIVQCTTDPSNNMEDVTTPSSARHKRGCNCKRSMCQKKYCECYQANVGCSSGCRCEGCRNIYGKKEDYVASEHALSKERVNSSVENGSDSTMHNKPEMVANRKDLSHHLSPLTPSLQCSDQGKEAAKARLLSGKYLSSPESGVNMFSKSSINSHCIVAYVERNEMLGTASYDLQMDGNNVNVHDQSSPTCDSVANVLQLTPLSNTESMSGASPFSSKAHEWTEIPPSRLSSRGCIRQLSGGSLRWRSSITPMTNIDETQYLQCPESDNRLFDIVEDETPDVLKEASTPIKSVKANSPIQKRVSPPPSHPRGIGSSSSGGLRNGRKFILQSVPSFPPLTPCADSKDNGNKDCSKDSGNGASK* 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01892 926 MobiDBLite consensus disorder prediction 456 501 - -
Rops9g01892 926 MobiDBLite consensus disorder prediction 874 888 - -
Rops9g01892 926 MobiDBLite consensus disorder prediction 1 42 - -
Rops9g01892 926 MobiDBLite consensus disorder prediction 86 125 - -
Rops9g01892 926 MobiDBLite consensus disorder prediction 486 501 - -
Rops9g01892 926 MobiDBLite consensus disorder prediction 427 446 - -
Rops9g01892 926 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 22 909 IPR044522 GO:0003700
Rops9g01892 926 SMART CXC_2 588 629 IPR033467 -
Rops9g01892 926 SMART CXC_2 503 544 IPR033467 -
Rops9g01892 926 ProSiteProfiles CRC domain profile. 504 628 IPR005172 -
Rops9g01892 926 MobiDBLite consensus disorder prediction 850 926 - -
Rops9g01892 926 MobiDBLite consensus disorder prediction 88 108 - -
Rops9g01892 926 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 591 625 IPR005172 -
Rops9g01892 926 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 506 541 IPR005172 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01892 Rops-Chr9 34497410 34503706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01892 820 904 CPP Transcription Factor Family AT4G14770 43.750 2.12e-08 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Rops9g01892 TCR 4.2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01892 K21776 - gmx:547664 982.245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01892 9 34497410 34503706 Rops9g01892 9 34497410 34503706 ECH
Rops9g01892 9 34497410 34503706 Rops10g02304 10 40812372 40814128 PCT