Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01890 ATGGATGTGTCCATAGATGGGGATCCTGCTGAAAGGATGGTTTTTGAGCTTTTCTATGATGTTGCTCCTAAGACCGCTGAAAATTTTCGTGCACTATGTACAGGAGAAAGGGGAGTCAGTCCATATACTGGAAAACCACTGCACTACAAGGGTTCTTTCTTCCATCAAATTGTAAAAGGCTCCGTTGTGCGGTCAGTTACCCTTGTTTATTCTGTAGGATACAGGGCTGATGGTCACGACTGCTTTTCTTGTGATGTAGTTTTAAGGGTGGTGATTTTGTCAAACGAAATGTTGTCCGGGTTGCAAGCGTTGTTCCATTTTCATGTTTCCTGTGACAATGGGACTGGTGGAGAAAGCATATATGGTTCCAAGTTTCCTGATGAGTCACCTAGGCTAAAGCATGACGCTCCAGGCCTTCTATCCATGGCAATTGCTGATCGCAACACTTTTGGTTCTCATTTTATCATCACTTTGAAAGCTGATCATCATCTTGATAGGAAGCATGTGGTCTTTGGCAAGCTTGTGCAAGGGCATAATATATTGAAGAAAATTGAAGATGTGGGCGATGAAGGAGTTCCAACTGTAACTGTAAAAATAATTAATTGTGGTGAACATGATGAGGATGGAAAGAAGACTTATAAGTCAAAAATTGGAAGGGATGGATCTTCTGAAGCCAATAGTCATGAAGCGCAGCGCAAGGGAAAGCACAGAAAATCTTCAGGAGACAGAAGGAAAAGGAGAAAATACTACTCATCAGAATCAGATAGTTCTTCAGATTCCGACATGGAGTCTTCAGAAAGTGAAAGTGATTCTGACTCAGATGTGTCTTCATCATCTTACATAAGTTCCTCCAGCGATGACAGGCGAAGGAAGAGAAAGAGATCTAGGAAAGATAAACATAGACATGGTAGAAGAAGAGATAAACATCGAGACAAGAGGCAAAGGAAACAAGATAAAAGATCAAAACGTAAATCAAGAAGGGAATTGGGCAGCTGTACTGATTCAGATAGTGGAAGTAAGAGTGACAATAGCTCTGATAGCAAAAGTCTTGGTGCTCGAGAGAAAAATCAGAAGCATAAAGACCATTCTCAGAGAAATGCAGCTGAGTCTTCCTTAGTTTTAGAGAAAGAAATACCTCCCGTGCATCCTAAAAAAAGGGAGGGAGAGGGTATGCTAGAGGAGGAAGAATTCCCAAAGGAAAATGGAGAGCGGCATAGCAACGGCATTGGGGCCAACTATAGATCTGACAGGAATGAAGAGAGGCAGCCTGATGTGATGGATGATCATCCTGGAAAATCTAGGAGTCGAAGCATGAGTCCTAAGCGAAGCATGAGTAAGAGTATGAGTATTAGTTCCAGGAGTGAGAGCAAAAGCCCAAGCATTAGTCCAAAAAGGAGGTTGAGCAGAAGTCCAAGTGGTAGTAGAAGCCCTCGTGCTCCATCACGGAGGAGTTTGAGCCGGAGTCCTGTTAGAAGCATCAGCAGAAGCCCAGTGAGAGGCAGGAAGGGGAGAGGTGCCAGTAGAAGCCCTGTGAGGTCTCGTGATCATAAAAGTGTCAGCAAGAGCCCTGTGAGATCTCGTGATCGTAGAAGTTTCAGCAAGAGCCCTGTGAGATCTTTTTCCCATAGCCGCAGGAGGAGTTCTCCCAGAATATCATCACGAAGAACAATCAGTAGAAGCCCTGTAAGAGTGTCAAGAAAAAGTTTAAGCAGGAGTCCAGTTAGATCATCTGCCAGAAGCTTAAGCAGAAGCTCTGGCAGGGTCCCTTTGAGAAGGATTAGCCGAAGTCCAGTTAGAATGCCAAGCAGGGGCAATCGCCGCAGTTATTCTAGGAGTCATAGCCCTGTACGTAGGGCAAGGACACCTCCAAGGAGGAGCTTGTCAAGAAGCGTGTCACCTGATGCTTCACCAAAACATATTAGGAGGGGGAGAGGTTTCAGTGAACGATACTCTTATGCTAGAAGGTATAGATCCCCCTCTCGATCTCCTGTGAGGTCATACCGCTATAATGGAAGAAGTGATCGTGACAGATATTCAGGTTACAGAAGGTACTCCCCAAGGCGATATAGGAGCCCACCACCACGCAGAAGAACCCCACCAAGGTACCGAAGTAGGAGAAGCAGGACTCCATCTGTATCACGCTACCGAGCTCGACGATATAGCCAGAGCCGGAGCCCAGTTCGCAGTCGTTCACCACCTCATGTGGATAGGCGCATGTCATCATCTCCGAGCAGGAGTCCATCACGATCCAGGTCTTCAGTGAAATCAGAATCTCCAAGAAAAGCAAGCAGAGACAGCAGGTCAAGGTCTTCGTCTGGAAGCCCAGTTGGAAAGAAAGGCCTGGTCTCTTATGGAGATGGTTCTCCCGATTCAAGCTAA 2379 0.4569 MDVSIDGDPAERMVFELFYDVAPKTAENFRALCTGERGVSPYTGKPLHYKGSFFHQIVKGSVVRSVTLVYSVGYRADGHDCFSCDVVLRVVILSNEMLSGLQALFHFHVSCDNGTGGESIYGSKFPDESPRLKHDAPGLLSMAIADRNTFGSHFIITLKADHHLDRKHVVFGKLVQGHNILKKIEDVGDEGVPTVTVKIINCGEHDEDGKKTYKSKIGRDGSSEANSHEAQRKGKHRKSSGDRRKRRKYYSSESDSSSDSDMESSESESDSDSDVSSSSYISSSSDDRRRKRKRSRKDKHRHGRRRDKHRDKRQRKQDKRSKRKSRRELGSCTDSDSGSKSDNSSDSKSLGAREKNQKHKDHSQRNAAESSLVLEKEIPPVHPKKREGEGMLEEEEFPKENGERHSNGIGANYRSDRNEERQPDVMDDHPGKSRSRSMSPKRSMSKSMSISSRSESKSPSISPKRRLSRSPSGSRSPRAPSRRSLSRSPVRSISRSPVRGRKGRGASRSPVRSRDHKSVSKSPVRSRDRRSFSKSPVRSFSHSRRRSSPRISSRRTISRSPVRVSRKSLSRSPVRSSARSLSRSSGRVPLRRISRSPVRMPSRGNRRSYSRSHSPVRRARTPPRRSLSRSVSPDASPKHIRRGRGFSERYSYARRYRSPSRSPVRSYRYNGRSDRDRYSGYRRYSPRRYRSPPPRRRTPPRYRSRRSRTPSVSRYRARRYSQSRSPVRSRSPPHVDRRMSSSPSRSPSRSRSSVKSESPRKASRDSRSRSSSGSPVGKKGLVSYGDGSPDSS* 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01890 792 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 1 204 IPR002130 GO:0000413|GO:0003755
Rops9g01890 792 MobiDBLite consensus disorder prediction 347 366 - -
Rops9g01890 792 MobiDBLite consensus disorder prediction 205 792 - -
Rops9g01890 792 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 4 203 IPR002130 GO:0000413|GO:0003755
Rops9g01890 792 MobiDBLite consensus disorder prediction 437 493 - -
Rops9g01890 792 MobiDBLite consensus disorder prediction 205 231 - -
Rops9g01890 792 MobiDBLite consensus disorder prediction 378 403 - -
Rops9g01890 792 MobiDBLite consensus disorder prediction 508 535 - -
Rops9g01890 792 Gene3D - 1 205 IPR029000 -
Rops9g01890 792 MobiDBLite consensus disorder prediction 688 713 - -
Rops9g01890 792 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 204 - -
Rops9g01890 792 MobiDBLite consensus disorder prediction 668 683 - -
Rops9g01890 792 MobiDBLite consensus disorder prediction 736 753 - -
Rops9g01890 792 MobiDBLite consensus disorder prediction 289 323 - -
Rops9g01890 792 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 138 153 IPR002130 GO:0000413|GO:0003755
Rops9g01890 792 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 153 165 IPR002130 GO:0000413|GO:0003755
Rops9g01890 792 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 166 181 IPR002130 GO:0000413|GO:0003755
Rops9g01890 792 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 17 32 IPR002130 GO:0000413|GO:0003755
Rops9g01890 792 MobiDBLite consensus disorder prediction 610 624 - -
Rops9g01890 792 MobiDBLite consensus disorder prediction 553 589 - -
Rops9g01890 792 MobiDBLite consensus disorder prediction 414 435 - -
Rops9g01890 792 MobiDBLite consensus disorder prediction 635 655 - -
Rops9g01890 792 SUPERFAMILY Cyclophilin-like 1 204 IPR029000 -
Rops9g01890 792 MobiDBLite consensus disorder prediction 714 729 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01890 Rops-Chr9 34474746 34481694 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01890 15 187 U-box Gene Family AT5G67530 30.460 1.66e-12 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01890 K09566 - csv:101210345 407.527