Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01889 ATGTTATTGTTCCATTTTCATGTTTCCTGTGACACTGGGACTGGTGGAGAAAGCATATATGGTTCCAGGTTTCTTGGTGAGAATGCTAAGTTATGGCTAAAGCATGATGCTTCAGGCCTTCTATGCATGGCAATTGATGATCGCAACATTTTTTGTTCTTATTTTATCATCACTTTGAAAGCTGATCACCATCTTGCTAGGAAGCATGTAGTCTTTGGCAAGCTTGTGCAAGGGCATAATATATTGAAGACAATTGAAGATGTGGGCGATGAAGAAGGAATTCCAACCCTGATTGTAATATAA 303 0.3894 MLLFHFHVSCDTGTGGESIYGSRFLGENAKLWLKHDASGLLCMAIDDRNIFCSYFIITLKADHHLARKHVVFGKLVQGHNILKTIEDVGDEEGIPTLIVI* 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01889 100 SUPERFAMILY Cyclophilin-like 9 96 IPR029000 -
Rops9g01889 100 Gene3D - 6 100 IPR029000 -
Rops9g01889 100 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 1 100 IPR002130 GO:0000413|GO:0003755
Rops9g01889 100 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 11 93 - -
Rops9g01889 100 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 16 92 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01889 Rops-Chr9 34451991 34453528 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01889 12 92 U-box Gene Family AT5G67530 40.244 3.29e-09 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01889 K09566 - gmx:100801588 129.028