Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01884 ATGTTAGCTGGTTTGGCATTCAAAAGGAAGTGGCAGAACAAAAGGAAACAAGAGGGTAAGCCTTGCGACAAACCCAACATTGTCACTGGAGCCAATGGTCAGGTTTACTGGGAGAAATTTGCAAGGTACTTTGAGGTGGAGTTGAAAGAAGTGAAGTTGCGCGATGGATACTATATAATGGACCCTGAAAAGGTTGTGGAATTGGTGGATGAGAACATCATTTGTGTTGCTGCTATCCTTGGTTCCGCACTAAATGGAGAGTTTGAAAATGTCAAGCGTTTAAATGATCTCCTTGTTGGAAAGAATAAAGAAACTGGATGGGACACTCCTATTCATGTGGATGCTGCCAGTGGTGGTTTCATTGCCCCATTTATTTATCCAAAGCTTAAGTGGGACTTTCGCTTACCATTAATGAAAAGCATCAATGTTAGTGGTCATAAGTATGGTCTAGTTTATGCCGTAATTGTTTGGGTTATTTGGAGAAGCAAGGATGACTTGCCTGAGGAACTCATCTTCCATATCAACTATCTTGGAGCTGATCAACCCACACGAAGTCACGGATTCCCCAGCATGCAATCAGCCATGAAACTTATAGCTCATGCTGCTCCTTGTGCCCGCATGGGTCCACGTTGCGTGAACAAGCTCATGACCAAGTCTCGACATGGCTCAACTTCCCGAACGGTGGAGTGCTATAAGACAACAACGGAGAATGAGAAATTTACTTGTGAAAAGCCTTATGGACAAAAGAAGAATCGTGGAAGGCATCGACGTAGTGAACGGTGTTGTCCACTTTCTAATCCAAATAATATTCTAAATGGGGATTGGGGTCCACACTTATGTTCCATGTCATATGGGAAGAAGCTAAGGACTTCGATCCCTCCTCCATTGCCTTGGGTACATCACGTCCTTCATGTCAACTTCCATGTTCAGTTCCTCAGCCTTGTTGCCATCCAGCCTCCCACAGCTGCCATTTTGGAGATTGTCCTCCTTGTTCAGTGCCTGTAG 1005 0.4448 MLAGLAFKRKWQNKRKQEGKPCDKPNIVTGANGQVYWEKFARYFEVELKEVKLRDGYYIMDPEKVVELVDENIICVAAILGSALNGEFENVKRLNDLLVGKNKETGWDTPIHVDAASGGFIAPFIYPKLKWDFRLPLMKSINVSGHKYGLVYAVIVWVIWRSKDDLPEELIFHINYLGADQPTRSHGFPSMQSAMKLIAHAAPCARMGPRCVNKLMTKSRHGSTSRTVECYKTTTENEKFTCEKPYGQKKNRGRHRRSERCCPLSNPNNILNGDWGPHLCSMSYGKKLRTSIPPPLPWVHHVLHVNFHVQFLSLVAIQPPTAAILEIVLLVQCL* 335
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01884 334 Pfam Pyridoxal-dependent decarboxylase conserved domain 1 181 IPR002129 GO:0016830|GO:0019752|GO:0030170
Rops9g01884 334 SUPERFAMILY PLP-dependent transferases 1 199 IPR015424 -
Rops9g01884 334 Gene3D - 1 236 IPR015421 GO:0003824
Rops9g01884 334 PANTHER GLUTAMATE DECARBOXYLASE 1 221 IPR010107 GO:0004351|GO:0006536|GO:0030170
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Rops9g01884 Rops-Chr9 34335199 34336399 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01884 1 221 Calmodulin-binding Proteins AT5G17330 75.113 1.19e-116 345
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01884 K01580 - nnu:104589582 347.821