Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01880 ATGTCTGGTTCTGCAACAATGGCGGCACATTCGAGTTCATTTGCTACCTCACTCGTCATGATCTCCCCTTATACCTTCTCCGCCATCGGAATCGCCGTCGCTATTGGCGTCTCCGTCCTCGGCGCTGCCTGGGGAATTTACATCACCGGTAGTAGCTTGATCGGTGCTGCAATCAAAGCTCCACGAATCACTTCCAAGAATCTCATTAGTGTAATCTTCTGTGAAGCTGTTGCGATATACGGGGTTATTGTGGCTATTATTCTTCAAACAAAATTAGAAAGTGTTCCAGCATCAAAGATCTATGAACCCGAGTCCATTAGAGCTGGATATGCAATCTTTGCTTCTGGAATTATCGTGGGCTTTGCAAATCTTGTTTGTGGGTTGTGTGTAGGAATAATTGGAAGCAGCTGTGCATTGTCCGATGCTCAGAACTCCTCTCTCTTTGTGAAAATTCTTGTGATTGAGATCTTTGGTAGCGCTCTTGGCCTTTTTGGAGTCATCGTTGGAATTATTATGTCAGCTCAAGCAACATGGCCCTCAAAAGTTTAG 549 0.4499 MSGSATMAAHSSSFATSLVMISPYTFSAIGIAVAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPASKIYEPESIRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPSKV* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01880 182 CDD ATP-synt_Vo_c_ATP6F_rpt1 26 88 - -
Rops9g01880 182 Gene3D - 24 178 IPR035921 -
Rops9g01880 182 FunFam V-type proton ATPase proteolipid subunit 24 179 - -
Rops9g01880 182 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 8 176 - -
Rops9g01880 182 PRINTS Vacuolar ATP synthase 16kDa subunit signature 42 66 IPR000245 GO:0033179|GO:0046961|GO:1902600
Rops9g01880 182 PRINTS Vacuolar ATP synthase 16kDa subunit signature 151 174 IPR000245 GO:0033179|GO:0046961|GO:1902600
Rops9g01880 182 PRINTS Vacuolar ATP synthase 16kDa subunit signature 124 150 IPR000245 GO:0033179|GO:0046961|GO:1902600
Rops9g01880 182 PRINTS Vacuolar ATP synthase 16kDa subunit signature 68 92 IPR000245 GO:0033179|GO:0046961|GO:1902600
Rops9g01880 182 SUPERFAMILY F1F0 ATP synthase subunit C 105 173 IPR035921 -
Rops9g01880 182 SUPERFAMILY F1F0 ATP synthase subunit C 21 91 IPR035921 -
Rops9g01880 182 CDD ATP-synt_Vo_c_ATP6F_rpt2 108 172 - -
Rops9g01880 182 Pfam ATP synthase subunit C 113 172 IPR002379 GO:0015078|GO:0033177|GO:1902600
Rops9g01880 182 Pfam ATP synthase subunit C 29 88 IPR002379 GO:0015078|GO:0033177|GO:1902600
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01880 1 181 Primary Pumps ATPases(2) AT2G25610 88.398 7.10e-109 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01880 K03661 - fve:101295776 311.227