Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01877 ATGGCTGCACCCTTGAGCTTCAACATAACAACAACATCAAAGGCCTTCCCAAAAGAGGATCCTAGTAAACCATGCAGATTGACTGCCTTTGTTGGCTACAAGGCTGGGATGACTCACATTGTTAAAGAGGTTGAGAAGCCGAGATCAAAGCTTCATAAGAAAGAGACATGTGAGGCTGTTACTACCATTGAAGCTCCACCATTGGTAGTTGTTGGAGTGGTGAGTTATGTGAAGACACCTCGTGGCCTTCACACTCTGAATACCGTTTGGGCTCCGCATTTAAGTGAGGAAGTTATGTTGAAGGGGTGCTGTGTTGGACCGAATCAAGCTTCCAAGGTTTCGGAGACAAATAACGGTCGAGGAGCATCTTCAGTTCATGGAATGGGAGGAATACTACGAAGCTGCTTGAAGTATGTCCGAATGTTGCATGTGAGGAACATGGTCACGTATGACCCAATGAAGCTCACGTATCCACCTTCGACAACTTCAACAGAGGAGCTCGAGAAGGTGCCCCAGTTTTCGAAGAATGGTGATGATGTGGGAGCAGTTGTTCATGCCCGAGAACTCGCTGCTGAGTGGCACCACGCGTTTCCGGCTACTCCTCTGTTGTAG 612 0.4804 MAAPLSFNITTTSKAFPKEDPSKPCRLTAFVGYKAGMTHIVKEVEKPRSKLHKKETCEAVTTIEAPPLVVVGVVSYVKTPRGLHTLNTVWAPHLSEEVMLKGCCVGPNQASKVSETNNGRGASSVHGMGGILRSCLKYVRMLHVRNMVTYDPMKLTYPPSTTSTEELEKVPQFSKNGDDVGAVVHARELAAEWHHAFPATPLL* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01877 203 Gene3D - 72 159 - -
Rops9g01877 203 Pfam Ribosomal protein L3 12 98 IPR000597 GO:0003735|GO:0005840|GO:0006412
Rops9g01877 203 PANTHER 60S RIBOSOMAL PROTEIN L3-RELATED 12 98 IPR045077 GO:0003735|GO:0005840|GO:0006412
Rops9g01877 203 Gene3D Ribosomal protein L3, domain 3 6 71 IPR044892 -
Rops9g01877 203 SUPERFAMILY Translation proteins 8 101 IPR009000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01877 Rops-Chr9 34235969 34236972 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01877 14 98 Cytoplasmic Ribosomal Protein Gene Family AT1G61580 81.176 2.27e-37 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01877 K02925 - fve:101290972 155.992