Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01851 ATGGGGCTTCAAAAGAAGGAAGAAGAAAGGATTGAAAGGATAATTCGGGGTCTTTTAAAACTCCCCGAAAATCGAAGATGCATTAACTGCAATATCTTGGGACCACAATATGTCTGTACAACTTTCTCAACATTTGTCTGCACAAATTGCAGTGGAATACATCGAGAATTTACCCATAGAGTAAAATCTGTGTCAATGGCTAAATTTACTCCAGAAGAAGTCACTGCTCTTCAAGCAGGTGGCAATGAGAGAGCAAAGCAGATTTATTTCAAAGAATGGGATCCTCTGCGTCATTCTTATCCTGATTCCTGTGGTAATCTACACAGACTTAGAGATTTTATCAAGAATGTCTATGTGGACAGAAAATACACTGGTGAAAGGGGTAGTGCCAGTCTTCCCAGGATTAGATTGAATGACAAGGAGGAGTCCTATGGGAATAAGAAGAGTAGTTCACTTCGTTTAGAGATCAAAAGTCCACATTCATGTCCTGGTGCAAGAAGTGATGACATTAGTTTCAGATATTTGTATGATGAAAGCAAAAGTCCTAAATATGCACAAAAATATTCAAGACGTGGTGGTCCCAGCAGAAGTCCTATAAAATTTGAGGTTGTTGATGACAGGTTTCGAGATGATGAGTATAGAAATCGCAGGCTTTCAAATTCAAAGCTAAGAACCCTGTCAATTGATGGTCAGAAGAATGTGGACAGATCCCAGCCTACTGTTGCACGCCCTTCGGGTGAAATGATGGGGGAGAATGCTCCACCTCCACAAGTCACACGTTCTGGTGGCGAGGGTTCTGTTGAGAAAAATCCATCAGAAAAATCAATTAATAAGCCAGAAAGCTGCATTGATTTGAGTACTAAGTCTCATCAGGTTTCTGATGCCACCAATGGAGTTGGATCAGAAACACCGCGTCTGTCACAACCAAGTGAAAGTAACTGGGCCACATTTGAAGCTTCTACAAAGGACGATGTTCCTAAAACTCCAAACACAAATACCATGAAATCTTCTACAAAAGAGGCAACACCTAAAGCAACATTTGCAAATCCTTTAGACCTTTTACTTTCTGAATTGTCAGGCCCTTTGGTTCCAACTACTGGTGGCATGTCAGAAGTCCCAAGTGGTAACAATGATCCAAAACCTACAACAGTAGAAAATGCCTCTGCTTGGGATTTTCCACCGACTTCAATGGGACAGACAACTGCATCACCCAAAAGTACTGATGTTTGGTCACTTACATCAACCACTGCCACTGAGCCGGCACAACCTTCTAATGCAGATCCTCCACAAGCTCAGATACATGATGCAAAAGACTCCAATGAAGCTTCATACGAGCAAAAACCATCAAGCATGCAATATCTTCCTTCTGTATCAGTAGGTTTTACTTCAACGGCACAACCAACAAATTCACCAGTCAAAGCTGTAGCTTCAACTAATCAGCCATCAGTTGCTCCTAATACAAATGACTTTTCACGTGCTTTTACTGAACTACCTTTTCAAATCACCTCAAAACCTACTCAAGATACCAGACCTGATGTTGGGTCCCAGCCTAGTACAGTGGAAACCAAGCCTAGTGGAAGAAGGGAACTTCCAGAGGACCTTTTTACTGCAAGCTACTCATCTGGCCCTGCACCACTTGCAGGTTGGCAGAATGTTCAACCTCATGGCATGGGATATGGCATGCAGTATTATCCTAATGCAGTGCCTCCTTCAGCACTTCCAATATCACCAAAGTCCACAAACCCATTTGAAGTAACTCCAGGGAGAAGTCTAATCCACGCCTCATCATTTCCTACTATGGCATCTTTGCAAGGTGTACTGCCTGCTGTAGCACCCAGAACAGGACTAATGCATGCTTCAAGCCACGGGTCTTTTGAGACAATGATGCATCAGTCCCCAAGTCATGCATCCCCAGTTCCTCCACGATCTCCCTTTGCATCTAGAGTTCCTACTGGTGTGAGCTTTGATCATGTTAATGAGGAGCAACCTACCAGACAACAAAGAGTTGACAGCTTCAATGGTGACATTACTGGTTTTGGAAAGCTAGACCCAATTCAACAGTCTTATGGAGGATATGGGAACCCCAGAACTCCAAATTCATTTTCCAATTCAAGAGGAAACCCATTTGAATAG 2133 0.4276 MGLQKKEEERIERIIRGLLKLPENRRCINCNILGPQYVCTTFSTFVCTNCSGIHREFTHRVKSVSMAKFTPEEVTALQAGGNERAKQIYFKEWDPLRHSYPDSCGNLHRLRDFIKNVYVDRKYTGERGSASLPRIRLNDKEESYGNKKSSSLRLEIKSPHSCPGARSDDISFRYLYDESKSPKYAQKYSRRGGPSRSPIKFEVVDDRFRDDEYRNRRLSNSKLRTLSIDGQKNVDRSQPTVARPSGEMMGENAPPPQVTRSGGEGSVEKNPSEKSINKPESCIDLSTKSHQVSDATNGVGSETPRLSQPSESNWATFEASTKDDVPKTPNTNTMKSSTKEATPKATFANPLDLLLSELSGPLVPTTGGMSEVPSGNNDPKPTTVENASAWDFPPTSMGQTTASPKSTDVWSLTSTTATEPAQPSNADPPQAQIHDAKDSNEASYEQKPSSMQYLPSVSVGFTSTAQPTNSPVKAVASTNQPSVAPNTNDFSRAFTELPFQITSKPTQDTRPDVGSQPSTVETKPSGRRELPEDLFTASYSSGPAPLAGWQNVQPHGMGYGMQYYPNAVPPSALPISPKSTNPFEVTPGRSLIHASSFPTMASLQGVLPAVAPRTGLMHASSHGSFETMMHQSPSHASPVPPRSPFASRVPTGVSFDHVNEEQPTRQQRVDSFNGDITGFGKLDPIQQSYGGYGNPRTPNSFSNSRGNPFE* 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01851 710 MobiDBLite consensus disorder prediction 658 673 - -
Rops9g01851 710 Gene3D Arf GTPase activating protein 2 132 IPR038508 -
Rops9g01851 710 MobiDBLite consensus disorder prediction 658 710 - -
Rops9g01851 710 MobiDBLite consensus disorder prediction 263 344 - -
Rops9g01851 710 MobiDBLite consensus disorder prediction 141 164 - -
Rops9g01851 710 MobiDBLite consensus disorder prediction 224 345 - -
Rops9g01851 710 PRINTS HIV Rev interacting protein signature 43 60 IPR001164 GO:0005096
Rops9g01851 710 PRINTS HIV Rev interacting protein signature 61 82 IPR001164 GO:0005096
Rops9g01851 710 PRINTS HIV Rev interacting protein signature 24 43 IPR001164 GO:0005096
Rops9g01851 710 SMART arf_gap_3 8 131 IPR001164 GO:0005096
Rops9g01851 710 CDD ArfGap_AGFG 18 123 - -
Rops9g01851 710 MobiDBLite consensus disorder prediction 443 483 - -
Rops9g01851 710 Pfam Putative GTPase activating protein for Arf 13 125 IPR001164 GO:0005096
Rops9g01851 710 SUPERFAMILY ArfGap/RecO-like zinc finger 11 124 IPR037278 -
Rops9g01851 710 FunFam Arf-GAP domain and FG repeat-containing protein 1 1 135 - -
Rops9g01851 710 MobiDBLite consensus disorder prediction 224 240 - -
Rops9g01851 710 MobiDBLite consensus disorder prediction 358 483 - -
Rops9g01851 710 MobiDBLite consensus disorder prediction 503 527 - -
Rops9g01851 710 MobiDBLite consensus disorder prediction 369 429 - -
Rops9g01851 710 MobiDBLite consensus disorder prediction 503 523 - -
Rops9g01851 710 MobiDBLite consensus disorder prediction 690 710 - -
Rops9g01851 710 PANTHER ARFGAP/RECO-RELATED 1 710 IPR044820 GO:0005096
Rops9g01851 710 ProSiteProfiles ARF GTPase-activating proteins domain profile. 12 131 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01851 Rops-Chr9 33375550 33384244 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01851 12 104 C2H2 Transcription Factor Family AT4G05330 35.052 5.51e-12 65.9