Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01815 ATGGTTGATATCACCAAGGCATTGGCAAGGCCAGCCTCTTACACAACCAAGTACTTCGGTTGTGAACTTGGAGTCCAATCCAAATTTGATGAGAAAGCTGGGACTTCTCATGTTAATGGGACATACGACACTCAGCAACTTGCTTCACATGGACTGTTCGATGTGCACGTAAAGGCTACAGGTGATATACATATTGATGATCATCACACAAATGAAGATGTTGCTCTCTCTATTGGAACGAGCTTCATGCTGCACCCACCGTGCGTACACAGCCTCAGCCTTAATGCGAGGAGAGAACGCGACGTAGCCATGGGGAGGAGACCTGCAAGGTGTTATCGTCAAAATAAAAACAAGCCATCTCCATTGCAGAGGAGGAGTATTGACGAGGATGCATTAATCAAAGCCCTTGATAGTGGAATAGTTGCTCTGGCAGCTCTTGATGTCTTCACCGAGGAGCCTCCCATGAACGATGACTTCGACTTCGCTGCTGGAGATAACAACAACGTCCCCGTTCTTAAGGTTGGAGAGGAGAAGGAGATAGCTAGCGGCCCAGCAAGTAGGGTGCCGTCAAGTAACTTTTTCTACCTGCGGAAACCTGGTTCACAGGGGCAACCAATCTCATTTGAGGATTCACCTGAGTGGGATGATACTGATATTCACGTTAGAGTTGAGGAAGGAGGTGACAGTATTAATGTTGCAGCAACACCGGTTTCTCCATCTCTCTCGAAGCTCAACAGCAAGTACCATCAGAGGAGACCCAAAGCCAGTAAACGTGTAGCAAAGGTCACACCGAGGTTCAAACGCGAGGGAGTCTACGCATGGACCGGCTTTGAACGAAACATTTTATGGTTGCATGGATAA 861 0.4774 MVDITKALARPASYTTKYFGCELGVQSKFDEKAGTSHVNGTYDTQQLASHGLFDVHVKATGDIHIDDHHTNEDVALSIGTSFMLHPPCVHSLSLNARRERDVAMGRRPARCYRQNKNKPSPLQRRSIDEDALIKALDSGIVALAALDVFTEEPPMNDDFDFAAGDNNNVPVLKVGEEKEIASGPASRVPSSNFFYLRKPGSQGQPISFEDSPEWDDTDIHVRVEEGGDSINVAATPVSPSLSKLNSKYHQRRPKASKRVAKVTPRFKREGVYAWTGFERNILWLHG* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01815 286 Gene3D - 1 46 - -
Rops9g01815 286 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 126 158 IPR036291 -
Rops9g01815 286 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 127 158 IPR006140 GO:0051287
Rops9g01815 286 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 2 44 IPR016189 GO:0003743|GO:0006413
Rops9g01815 286 Gene3D - 126 161 - -
Rops9g01815 286 Pfam Domain found in IF2B/IF5 1 49 IPR002735 GO:0003743|GO:0006413
Rops9g01815 286 ProSitePatterns Imidazoleglycerol-phosphate dehydratase signature 1. 65 78 IPR020565 GO:0000105|GO:0004424
Rops9g01815 286 Gene3D Imidazole glycerol phosphate dehydratase; domain 1 47 84 IPR038494 -
Rops9g01815 286 SUPERFAMILY Ribosomal protein S5 domain 2-like 45 82 IPR020568 -
Rops9g01815 286 PANTHER IMIDAZOLEGLYCEROL-PHOSPHATE DEHYDRATASE HIS7 45 82 IPR000807 GO:0000105|GO:0004424
Rops9g01815 286 Pfam Imidazoleglycerol-phosphate dehydratase 45 82 IPR000807 GO:0000105|GO:0004424
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01815 Rops-Chr9 32568326 32569363 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01815 1 88 Eukaryotic Initiation Factors Gene Family AT1G36730 51.136 4.59e-19 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01815 - - pper:18773155 122.094