Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01808 ATGGGTACCATCAGCCTTGAACAGATCAAAAGCGAGAACGTGGATCTGGAACACATTCCAATAGAGGAGGTGTTTGAGCAGCTGAAATGTTCAAGAGAAGGAATAACATCAGAGGAAGGAGTCGACAGGCTTCAAGTCTTTGGACCAAACAAGTTGGAAGAGAAAAAGGAGAGCAAGGTTTTGAAGTTCTTGGGTTTTATGTGGAATCCCTTGTCATGGGTCATGGAAGCTGCTGCTATAATGGCCATTGCTTTGGCAAATGGAGGAGGAAGGCCTCCGGATTGGCAAGATTTTGTGGGAATCATTGCTCTACTTGTGATCAACTCCACAATCAGTTTCATTGAGGAAAACAATGCAGGCAATGCTGCTGCTGCACTTATGGCTGGTTTAGCCCCCAAGACCAAGGTACTAAGAGATGGCAGATGGAGTGAACAAGATGCTGCAATTCTAGTACCAGGAGACATAATCAGTATCAAGTTAGGAGATATCATTCCAGCTGATGCCCGTCTTCTTGAGGGTGATCCTTTGAGTGTTGATCAGTCTGCTTTAACAGGAGAATCTCTTCCTGTGACAAAGAGTTCCCATGATGAAGTGTATTCAGGATCAACTGTTAAGAAGGGTGAGATTGAAGCAGTGGTGATTGCTACTGGGGTGCACACCTTTTTTGGTAAAGCAGCTCATCTTGTAGACAGCACTAACCAAGTTGGACACTTTCAGAAAGTACTTACAGCAATTGGTAATTTCTGCATTTGCTCAATTGCTGTTGGAATAATCATTGAGCTCATAGTCATGTACCCGATACAACACCGCAAATACAGAGATGGAATTGACAATCTTTTGGTGCTCTTGATTGGAGGCATTCCTATTGCCATGCCAACTGTTCTGTCTGTCACTATGGCTATTGGTTCTCATAGACTTTCTCAGCAGGGTGCAATTACAAAAAGAATGACAGCTATTGAGGAAATGGCTGGGATGGATGTCCTCTGCAGTGATAAAACTGGGACTCTCACTCTGAATAAGCTGAGTGTTGATAAAAACTTGATTGAGGTGCTTGCTAAGGGTGTTGAGAAAGACCATGTTATCCTTCTAGCAGCTAGAGCTTCTAGGACTGAAAATCAGGATGCCATAGATGCTGCAATTGTTGGGATGCTTGCTGACCCAATGGAGGCAAGAGCTGGTATTTCTGAGGTCCATTTCTTTCCATTCAATCCTGTAGAAAAGAGAACTGCTCTGACTTACATTGATTCTGATGGAAATTGGCATCGAGCTAGCAAAGGGGCTCCTGAGCAGATATTGAATCTTTGCAATGCCAGAGAGGATGTCAAGAAAAGGGTTCATGCAGTAATTGATAGGTATGCTGATCGTGGACTTCGGTCTTTAGGTGTTGCAAGACAGGGAGTACCTGAGAAAACAAAGGATAGTCCTGGTGGACCATGGCAATTTGTTGGTGTGCTGCCACTGTTGGATCCTCCAAGGCATGATAGTGCTGAAACCATTAGAAGAGCTCTTACCCTTGGTGTGAATGTGAAGATGATTACTGGGGATCAGCTTGCCATTGGAAAGGAAACAGGCCGAAGGCTTGGAATGGGAACAAACATGTACCCATCATCTGCATTGCTTGGCCAAGACAAGGATGCTTCATCTGTTTTGGATCTTCCTGTTGATGAGTTGATTGAGAAGGCTGATGGATTTGCAGGAGTATTTCCTGAACACAAATATGAAATTGTCAAGAGGCTGCAAGAGAGGAAGCATATATGTGGAATGACAGGAGATGGTGTAAATGATGCACCTGCATTAAAGAAAGCAGATATTGGAATTGCTGTTGCTGATGCTACAGATGCTGCTAGAAGTGCATCTGATATTGTCCTCACTGAACCCGGTCTAAGTGTCATTATTAGTGCAGTGCTCACCAGCAGGGCAATTTTCCAGCGGATGAAGAATTATACTATTTATGCTGTGTCAATTACCATTCGTATTGTGTTCGGTTTCATGTTCATTGCGTTGATCTGGAAGTTTGATTTTTCACCCTTCATGGTTTTGATTATTGCCATACTAAATGATGGTACTATTATGACAATATCAAAGGATAGAGTGAAACCATCTCCACTGCCTGACAGCTGGAAACTGAAGGAGATCTTTGCTACTGGTATTGTGCTAGGCAGTTACATGGCACTAATGACAGTGATATTTTTCTGGGTTATGAGTGATACCAACTTCTTCTCGGACAAGTTTGGTGTGAGGTCTCTGAAAAATAGCCCTCATGAGATGATGGCAGCTTTGTACCTACAAGTCAGTATAATAAGCCAGGCATTGATTTTTGTCACTAGGTCCCGTAGCTGGTCTTTTGTTGAAAGACCCGGTCTTCTCCTGCTAGGTGCTTTTATGATTGCTCAGCTGGTGGCAACTTTTGTAGCAGTATATGCTAACTGGGGCTTTGCAAGAATAAAGGGAATGGGATGGGGTTGGGCTGGTGTAATCTGGCTCTACAGTTTGATAACCTATATCCCTCTTGATTTACTCAAATTTGCAATCCGTTATGCTCTGAGTGGGAAGGCTTGGGATAATATTTTGGAGAACAGAACTGCCTTCTCTGGAAAGAAAGACTATGGAAGAGAAGAGAGGGAAGCACAATGGGCAGCTGAACAAAGGTCTCTTCATGGTCTTCAGCCTCCAGAAACCTCCAACCTTTTTGATGACAGGAGTAGCTATAGGGAGCTTTCAGAGATTGCAGAACAAGCCAAGAGACGTGCTGAAGTTGTAAGGCTTAGGGAGCTTCATACTCTAAAGGGACATGTTGAATCAGTGGTGAAGCTGAAGGGACTTGACATTGATACAATTAATCAGAACTACACAGTTTAA 2859 0.4337 MGTISLEQIKSENVDLEHIPIEEVFEQLKCSREGITSEEGVDRLQVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRPPDWQDFVGIIALLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGRWSEQDAAILVPGDIISIKLGDIIPADARLLEGDPLSVDQSALTGESLPVTKSSHDEVYSGSTVKKGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGIIIELIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVLAKGVEKDHVILLAARASRTENQDAIDAAIVGMLADPMEARAGISEVHFFPFNPVEKRTALTYIDSDGNWHRASKGAPEQILNLCNAREDVKKRVHAVIDRYADRGLRSLGVARQGVPEKTKDSPGGPWQFVGVLPLLDPPRHDSAETIRRALTLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDASSVLDLPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGIVLGSYMALMTVIFFWVMSDTNFFSDKFGVRSLKNSPHEMMAALYLQVSIISQALIFVTRSRSWSFVERPGLLLLGAFMIAQLVATFVAVYANWGFARIKGMGWGWAGVIWLYSLITYIPLDLLKFAIRYALSGKAWDNILENRTAFSGKKDYGREEREAQWAAEQRSLHGLQPPETSNLFDDRSSYRELSEIAEQAKRRAEVVRLRELHTLKGHVESVVKLKGLDIDTINQNYTV* 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01808 952 FunFam Plasma membrane ATPase 132 216 - -
Rops9g01808 952 SUPERFAMILY Calcium ATPase, transduction domain A 132 229 IPR008250 -
Rops9g01808 952 PANTHER CALCIUM-TRANSPORTING ATPASE 19 883 - -
Rops9g01808 952 FunFam Plasma membrane ATPase 481 637 - -
Rops9g01808 952 SUPERFAMILY HAD-like 325 636 IPR036412 -
Rops9g01808 952 FunFam Plasma membrane ATPase 341 488 - -
Rops9g01808 952 NCBIfam HAD-IC family P-type ATPase 564 678 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Rops9g01808 952 NCBIfam HAD-IC family P-type ATPase 101 350 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Rops9g01808 952 SMART Cation_ATPase_N_a_2 15 87 IPR004014 -
Rops9g01808 952 Gene3D - 901 952 - -
Rops9g01808 952 Gene3D - 94 816 - -
Rops9g01808 952 Pfam haloacid dehalogenase-like hydrolase 325 603 - -
Rops9g01808 952 Gene3D - 326 626 IPR023214 -
Rops9g01808 952 FunFam ATPase 4 plasma membrane-type 574 816 - -
Rops9g01808 952 Gene3D - 341 488 IPR023299 GO:0000166
Rops9g01808 952 Coils Coil 903 923 - -
Rops9g01808 952 Pfam E1-E2 ATPase 131 308 - -
Rops9g01808 952 NCBIfam plasma-membrane proton-efflux P-type ATPase 34 807 IPR006534 GO:0008553|GO:0016020|GO:0120029
Rops9g01808 952 PRINTS H+-transporting ATPase (proton pump) signature 589 605 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Rops9g01808 952 PRINTS H+-transporting ATPase (proton pump) signature 561 577 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Rops9g01808 952 PRINTS H+-transporting ATPase (proton pump) signature 620 645 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Rops9g01808 952 PRINTS H+-transporting ATPase (proton pump) signature 761 782 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Rops9g01808 952 PRINTS H+-transporting ATPase (proton pump) signature 445 463 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Rops9g01808 952 SUPERFAMILY Calcium ATPase, transmembrane domain M 14 848 IPR023298 -
Rops9g01808 952 Gene3D - 132 216 - -
Rops9g01808 952 SFLD p-type atpase 311 640 IPR044492 -
Rops9g01808 952 CDD P-type_ATPase_H 34 842 IPR006534 GO:0008553|GO:0016020|GO:0120029
Rops9g01808 952 PRINTS P-type cation-transporting ATPase superfamily signature 589 608 - -
Rops9g01808 952 PRINTS P-type cation-transporting ATPase superfamily signature 483 494 - -
Rops9g01808 952 PRINTS P-type cation-transporting ATPase superfamily signature 505 515 - -
Rops9g01808 952 PRINTS P-type cation-transporting ATPase superfamily signature 612 624 - -
Rops9g01808 952 PRINTS P-type cation-transporting ATPase superfamily signature 179 193 - -
Rops9g01808 952 PRINTS P-type cation-transporting ATPase superfamily signature 329 343 - -
Rops9g01808 952 SFLD Haloacid Dehalogenase 311 640 - -
Rops9g01808 952 ProSitePatterns E1-E2 ATPases phosphorylation site. 331 337 IPR018303 -
Rops9g01808 952 Pfam Cation transporter/ATPase, N-terminus 18 81 IPR004014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01808 Rops-Chr9 32455608 32464180 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01808 4 952 Primary Pumps ATPases AT2G07560 82.403 0.0 1610
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01808 K01535 - gmx:100791692 1691.01