Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01800 ATGGCTGCTTCTGGTTCTGGTTCTGGTAACATTGATAGTGGAAAATTTGAGAATTTGATTCATGCTAGGAAGTCATTGAAACTTAGCCTAGATAAATCAAAGTCTTTGGGGTTAACATTAGAGAAAACAGGGCCTAGATTGGAGGAGATTAGGCAAAGGTTGCCTACCCTTGGATCGGCGGTTCGACCAATTCGGGCGGAGAAGGATGCCCTTGTGGCTGTTGGTGGCCACATTAATCGGGCGGTTGGCCCTGCGGCTGCCGTGCTGAAGGTTTTTGATGCGGTTCACGGACTAGAGAAGTCACTCTTGTCGGATCCTAGGAATGATCTCCCCGGCTATCTGTCGGTGTTGAAGCGCCTGGAGGAGGCATTGAGGTTCTTGGGAGACAATTGTGGATTGGCTCTTCAGTGGCTGGATGATATAATTGAGTACTTGGAAGATAACTCTGTTGCGGATCAAGTGTATCTTGCGAATTTGAAGAAGGAATTGGAGAGTCTCCGGGGATTGCAGAATGCCGAGCTGGATGGTGGACTATTAGATGCTGCATTGGATAAACTAGGGAATGAGTTCCGGTTGCTATTGACTGAAAACAGCGTGCCACTGCCGATGTCCTCCCTCGGTGATCAAGCCTGCATTGCCCCTTCACCTTTGCCTGTGTCTGTTATTCATAAATTGCAGGCGATTCTTGGTAGATTGATGGCTAATGATAGACTTGACAAGTGCATATCGATTTATGTTGAAGTCCGTAGTTCTAATGTGAGAGCGAGTTTGCAGGCTCTCAATTTGGATTACCTTGAGATCTCCGTGTCTGAATTTAATGATGTACAGAGTATAGAGGGGTATATAGCTCAGTGGGGAAAGCATTTGGAGTTTGCAGTGAAACATTTGTTTGAGGCGGAGTATAAGCTTTGTAATGATGTGTTTGAGAGGCTTGGATTGGATGTGTGGATGGGTTGCTTTTCGAAGATAGCTGCACAGGCGGGTATACTTGCATTTCTTCAATTTGGGAAGACTGTTACTGAGAGTAAAAAAGACCCTATTAAGCTTTTGAAGTTGTTGGATATTTTTGCATCTTTGAACAAATTGAGACTGGATTTCAACCGTCTTTTTGGGGGAGCAGCATGTGTTGAAATCCAGAATTTGACAAGGGATCTTATCAAGAGCGTGATTGATGGGGCAGCAGAGATTTTCTGGGAACTTCTGGTTCAGGTAGAGTTACAGAGGCAGAACCCACCTCCTCCAGATGGCAATGTCCCAAGATTGGTGAGCTTTATCACGGATTACTGCAACAAACTCCTAGGGGAGGACTATAAGCCAATACTGACCCAAGTCCTTATCATTCACCGAAGTTGGAAGCGTCAAAGCTTTCAGGAGAAACTCCTTGTTAATGAGGTTTTGAATATAATGAAAGCTGTTGAATCAAATTTGGAGACATGGATCAAGGCTTATGATGATCCTATGCTGTCCAACTTTTTTGCTATGAACAATCACTGGCATCTATACAAGCATTTGAAAGGGACAAAGCTTGGGGATCTCCTGGGGGATTCTTGGTTAAGGGAACATGAACAGTATAAGGACTATTACTCCACAATCTTCTTGCGGGACAGCTGGGGAAAGCTTCCTGGACATTTGAGTAGGGAAGGGCTGATTCTCTTCTCAGGAGGGCGTGCCACTGCTCGTGATCTGGTCAAGAAAAGATTGAAAAAGTTCAATGAAGTTTTTGATGAGATGTTTACAAAGCAATCAGGTTGGATCATGCCAGAACGAGATCTGAGAGAGAAGACATGTCAGCTTATAGTGCAGGCTGTGGTACCTGTTTACCGGAGTTACATGCAGAATTATGGTCCCTTGGTTGAGCAAGATGGTAGCTCCACAAAATATGCAAAATACACAGTGCAGAAGCTGGAGGAAATACTTTTGTGTCTTTATCGGCCAAAGCCTGTAAGACATGGCAGCTTAAGAAGTCCACAGTTCAGTGGAAAATATGGCAATGGATTACCTGATCTTCGTCGTACAGCCTCTGCAGTTGTGTAA 2034 0.4459 MAASGSGSGNIDSGKFENLIHARKSLKLSLDKSKSLGLTLEKTGPRLEEIRQRLPTLGSAVRPIRAEKDALVAVGGHINRAVGPAAAVLKVFDAVHGLEKSLLSDPRNDLPGYLSVLKRLEEALRFLGDNCGLALQWLDDIIEYLEDNSVADQVYLANLKKELESLRGLQNAELDGGLLDAALDKLGNEFRLLLTENSVPLPMSSLGDQACIAPSPLPVSVIHKLQAILGRLMANDRLDKCISIYVEVRSSNVRASLQALNLDYLEISVSEFNDVQSIEGYIAQWGKHLEFAVKHLFEAEYKLCNDVFERLGLDVWMGCFSKIAAQAGILAFLQFGKTVTESKKDPIKLLKLLDIFASLNKLRLDFNRLFGGAACVEIQNLTRDLIKSVIDGAAEIFWELLVQVELQRQNPPPPDGNVPRLVSFITDYCNKLLGEDYKPILTQVLIIHRSWKRQSFQEKLLVNEVLNIMKAVESNLETWIKAYDDPMLSNFFAMNNHWHLYKHLKGTKLGDLLGDSWLREHEQYKDYYSTIFLRDSWGKLPGHLSREGLILFSGGRATARDLVKKRLKKFNEVFDEMFTKQSGWIMPERDLREKTCQLIVQAVVPVYRSYMQNYGPLVEQDGSSTKYAKYTVQKLEEILLCLYRPKPVRHGSLRSPQFSGKYGNGLPDLRRTASAVV* 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01800 677 Gene3D Exocyst complex component Exo70 140 650 - -
Rops9g01800 677 PANTHER EXOCYST COMPLEX PROTEIN EXO70 82 639 IPR004140 GO:0000145|GO:0006887
Rops9g01800 677 FunFam Exocyst subunit Exo70 family protein 138 649 - -
Rops9g01800 677 Pfam Exo70 exocyst complex subunit 284 639 IPR046364 GO:0000145|GO:0005546|GO:0006887
Rops9g01800 677 SUPERFAMILY Cullin repeat-like 88 643 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01800 Rops-Chr9 32262417 32265506 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01800 1 677 EXO70 exocyst subunit family AT4G31540 73.844 0.0 1045
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01800 K07195 - gmx:100796139 1182.55