Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01799 ATGGCAGTGGAACTCATGGGGTTCCCAAAACTGGACGAGCAAAAGGCCATACAAGAGGCCGCATCAGAAGGCCTTAATAGCATCCAACACCTGATCCGAACCCTCAACCATCAACCTAACCACTTAGACACTCACCTCACCGATCTCACCGTCTCCAAGTTCAAAAAACTCATCTCCTTCTTAAACCGAACCGGTCACGCCCGGTTCAGACGAGCCCCCGTTCAACCATCTTCCTCATCAAACATCTCAATCGCACCGGTTCAGACCGCACCTTCCTCTCTCCCTTCTCCGCAACAGCTAACCTCAACCGTTTCTCCGTCGGTTCAGTTCGCTTCTCCTGCTCCGGTCACCGTCCATCACGCCTTTGTCCCGGCGCAACCGCAGACACTCACACTCGATTTCACGAAGCCGAATAACAGCGTTGTCTTGAGCTCCAACGCTAAATCCATGGAACTCGAGTTCTCGAAGGAAACATTCAGCGTTTCCTCGAACTCCTCATTCATTTCTTCCGCCATCACTGGTGACGGAAGCGTCTCCAACGGAAAACAAGGATCCTCGATCTTCCTAACTCCGGCGGCGGCTGCACCGGCGACATCCAGCGGAAAACCACCGCTTTCGTCGGCAAATTTAAAGAAAAGGTGCCACGACCACCGCGAGCACTCCGACGACGTCTCCGGTTCAAGCAAGTGCCACTGCATCAAGAGAAGGAAAAATCGGGTGAAGAAAACAGTGAGGGTGCCGGCGGTTAGTTCAAAAATCGCCGATATACCGCCGGACGAGTACTCGTGGCGAAAATACGGTCAGAAACCGATCAAGGGGTCACCGTATCCACGGGGTTATTATAAGTGCAGCACAGTGAGAGGGTGCCCGGCGAGGAAACACGTGGAGCGTGCACCTGATGATCCGGCGATGCTGATAGTGACGTATGAGGGGGAGCACAGACACGCGGTTCAGGCCGCGATGCAGGAGAACGCAGCCGGGATTGTGGGTTTGGTGTTCGAGTCAACGTAG 1011 0.543 MAVELMGFPKLDEQKAIQEAASEGLNSIQHLIRTLNHQPNHLDTHLTDLTVSKFKKLISFLNRTGHARFRRAPVQPSSSSNISIAPVQTAPSSLPSPQQLTSTVSPSVQFASPAPVTVHHAFVPAQPQTLTLDFTKPNNSVVLSSNAKSMELEFSKETFSVSSNSSFISSAITGDGSVSNGKQGSSIFLTPAAAAPATSSGKPPLSSANLKKRCHDHREHSDDVSGSSKCHCIKRRKNRVKKTVRVPAVSSKIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERAPDDPAMLIVTYEGEHRHAVQAAMQENAAGIVGLVFEST* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01799 336 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 15 321 IPR044810 GO:0003700
Rops9g01799 336 MobiDBLite consensus disorder prediction 195 228 - -
Rops9g01799 336 SMART WRKY_cls 257 317 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops9g01799 336 ProSiteProfiles WRKY domain profile. 252 318 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops9g01799 336 Pfam WRKY DNA -binding domain 259 315 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops9g01799 336 MobiDBLite consensus disorder prediction 71 101 - -
Rops9g01799 336 Pfam Plant zinc cluster domain 211 255 IPR018872 -
Rops9g01799 336 Gene3D WRKY domain 243 318 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops9g01799 336 SUPERFAMILY WRKY DNA-binding domain 255 317 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops9g01799 336 MobiDBLite consensus disorder prediction 209 228 - -
Rops9g01799 336 MobiDBLite consensus disorder prediction 73 101 - -
Rops9g01799 336 FunFam WRKY transcription factor 65 241 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01799 Rops-Chr9 32234936 32236782 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01799 1 335 WRKY Transcription Factor Family AT2G24570 60.290 1.36e-120 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Rops9g01799 WRKY 9.2e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01799 - - gmx:100127381 471.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01799 9 32234936 32236782 Rops9g01799 9 32234936 32236782 ECH