Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01790 ATGTGGTATCAAAAGAGTTCTCATCATCATTATGACAGGAAGGATGGTGTGAATGGGATAGTGGCAGTGGCCATAGACACAAATAAAGGGAGCCAGAATGCACTTAAATGGGCCATTGATAATCTCCTCAACAAAGGTTCAACTGTAGTTCTCATCCATGTCAAGAATAAGGCATCTTCTCTTTCTGCATTACCTTCTCTTCCAGCCCCAAGGTCAGGGATAAATGGTAATGTTGAGCACTACCCTGATGCCCACACCAAAGAAATTTTCCGCCCGTTTCGTGTCTTCTGTGCACGGAAAGATATAAACTGCAAGGACGTTGTACTAGAAGAAGTAGATACATCCAAAGCTTTAATTGAATATACTTCTCATTATGCTATTGAGCATTTGGTTATAGGCTCTTCACACAAAACTGGTTTTCTCAGAAGATTCAAGACATCAGATGTTCCAGGAACAGTGACAAAAGGGGCACCAGATTTCTGTACAGTATATGTTGTTGCTAAAGGAAAGATTCAATCCATGAGATCTGCTTCTCGTCCTGCTCCTGTCTATTCCCCTCTGCAAAGCCAGCTTACTCATGCCACTACCAAGTCAGACCAATCAGACCCACGTGTGCCTCCCGCCAGTAGTACCAAAGGAAATGAGAGGCGGTCCCTTGAAGCACCCCGTAAATCACAGGAGGGAACAGAATCCTTCAGGTCACCATTTACAAGGAGAGGTGTTAATGACAAGCCACTAGGAGAAATTTCAGATACTGGCATAACCTTTGTAAGCTCAGGAAGGTCAAGTATAGACCGATTGTTTCCTTCCATATATAACAACTCAGAGTCAGGCATATCCAACCCTCGGTTTTCATTTAGCTCAGATACTGATGCAAATCATAGCTTTGAGTCCATGCATCATGGAAGGAGGTCTATGGATACCAGCTCTCCTGAATTCTCATCTTTCTCACAGGATAGTGAGGGGGGGTTATCATCTACATCACAGTCCATGGATGATGTGGAGGCTGAAATGAGGAGACTGAAGTTGGAGCTCAAGCAAACAATGGAAATGTATAGCAATGCATGTAAAGAAGCACTCACAGCACAACAGAAGGCTGTAGAACTACAGCGCTGGAAATTAGAGGAAGAGAGGAGATTAGAGGAAGCAAGGCTAGCTGAAGAAGCTGCATTGTCAATGGCAGAAAAGGAGAAGGCAAAATCAAAAGCAGCCATTGAGGCTGCTGAAGCACAGAAGAGGATTGCAGAACTGGAAGCACAAAAGAGAATAAATGCAGAAATGAAAGCACTCAACGAATCAGATGAGAAAAGATTCACATTTGATGCTTTTACAAAAAAAGGTATCAGGTATAGAAGGTATTCAATTGAGGAGATTGAAGCTGCAACAAATTTTTTTGCAGAGTCCCTGAAGATTGGAGAAGGGGGTTATGGTCCAGTTTATAAGTGCCTTCTGGATCATACACCTGTTGCAGTTAAGGCTCTGCGTCCTGATGCAGCACAAGGAAGGTCACAGTTTCAACGAGAGGTTGAGGTATTGAGCTGCATTAGGCATCCAAACATGGTTCTCCTCCTGGGAGCCTGCCCAGAGTATGGCTGCCTTGTTTATGAGTACATGGCAAATGGAAGCTTGGATGATCGCCTTTTTTGTAGAGGAAACACTCAACCAATTCCTTGGCAGCTCAGGTTCAAAATTGCAGCTGAAATTGGCACTGGCTTGCTGTTCCTCCACCAAACAAAACCTGAGCCTCTGGTGCATAGAGACCTGAAACCAGGTAACATCTTACTTGACAGAAACTATGTGGCAAAGATCAGTGATGTAGGTTTGGCAAGGCTAGTCCCACCATCAGTGGCTGACAATGTGACACAATATCGCATGACATCAACTGCTGGAACTTTCTGCTATATAGATCCTGAGTACCAGCAAACAGGAATGTTAGGAGTGAAATCTGACATATACTCACTTGGGATCATTTTCTTGCAAATATTGACAGCAAGACCACCAATGGGTTTGACACATCATGTTGCAAGAGCCATTAAGAAGGGAACATTGGCTGACATGTTGGACCCAAATGTGCCAGATTGGCCTGTAGAGGAGGTCTTGTGCTTAGCAAAGTTGGCAGTCCAGTGTGCTGAGTTAAGGAGGAAAGACAGACCTGATCTTTGCAGGGAAGTCCTTCCTGAACTACAAAGGCTAAGAGAACTTGCTGAAAATAATGATCCGCATTCATTTTTGGGTGGCAACATTAGCCCATCCAATCATAGCCAAGTTTCTCTTCAGCTGGATGGATCACTTCCTTATTCTGGGGAGAGCTCAAGAAACACATTAAGCCCAAGATCCCCTTCAGCAAAATAA 2352 0.4392 MWYQKSSHHHYDRKDGVNGIVAVAIDTNKGSQNALKWAIDNLLNKGSTVVLIHVKNKASSLSALPSLPAPRSGINGNVEHYPDAHTKEIFRPFRVFCARKDINCKDVVLEEVDTSKALIEYTSHYAIEHLVIGSSHKTGFLRRFKTSDVPGTVTKGAPDFCTVYVVAKGKIQSMRSASRPAPVYSPLQSQLTHATTKSDQSDPRVPPASSTKGNERRSLEAPRKSQEGTESFRSPFTRRGVNDKPLGEISDTGITFVSSGRSSIDRLFPSIYNNSESGISNPRFSFSSDTDANHSFESMHHGRRSMDTSSPEFSSFSQDSEGGLSSTSQSMDDVEAEMRRLKLELKQTMEMYSNACKEALTAQQKAVELQRWKLEEERRLEEARLAEEAALSMAEKEKAKSKAAIEAAEAQKRIAELEAQKRINAEMKALNESDEKRFTFDAFTKKGIRYRRYSIEEIEAATNFFAESLKIGEGGYGPVYKCLLDHTPVAVKALRPDAAQGRSQFQREVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLDDRLFCRGNTQPIPWQLRFKIAAEIGTGLLFLHQTKPEPLVHRDLKPGNILLDRNYVAKISDVGLARLVPPSVADNVTQYRMTSTAGTFCYIDPEYQQTGMLGVKSDIYSLGIIFLQILTARPPMGLTHHVARAIKKGTLADMLDPNVPDWPVEEVLCLAKLAVQCAELRRKDRPDLCREVLPELQRLRELAENNDPHSFLGGNISPSNHSQVSLQLDGSLPYSGESSRNTLSPRSPSAK* 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01790 783 MobiDBLite consensus disorder prediction 175 251 - -
Rops9g01790 783 MobiDBLite consensus disorder prediction 742 783 - -
Rops9g01790 783 Pfam Protein kinase domain 468 718 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01790 783 FunFam U-box domain-containing protein 51 538 738 - -
Rops9g01790 783 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 21 155 - -
Rops9g01790 783 MobiDBLite consensus disorder prediction 178 215 - -
Rops9g01790 783 ProSiteProfiles Protein kinase domain profile. 465 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01790 783 MobiDBLite consensus disorder prediction 295 333 - -
Rops9g01790 783 PANTHER OS02G0152300 PROTEIN 21 749 - -
Rops9g01790 783 Coils Coil 782 783 - -
Rops9g01790 783 ProSitePatterns Serine/Threonine protein kinases active-site signature. 583 595 IPR008271 GO:0004672|GO:0006468
Rops9g01790 783 Gene3D HUPs 20 168 IPR014729 -
Rops9g01790 783 CDD STK_N 20 169 - -
Rops9g01790 783 SMART serkin_6 465 731 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01790 783 MobiDBLite consensus disorder prediction 308 332 - -
Rops9g01790 783 SUPERFAMILY Protein kinase-like (PK-like) 448 720 IPR011009 -
Rops9g01790 783 Gene3D Transferase(Phosphotransferase) domain 1 538 744 - -
Rops9g01790 783 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 438 537 - -
Rops9g01790 783 Pfam Universal stress protein family 21 147 IPR006016 -
Rops9g01790 783 Gene3D Phosphorylase Kinase; domain 1 444 537 - -
Rops9g01790 783 CDD STKc_IRAK 471 731 - -
Rops9g01790 783 Coils Coil 324 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01790 Rops-Chr9 32071988 32080002 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01790 1 758 Receptor kinase-like Gene Family AT1G78940 57.494 0.0 804
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Rops9g01790 Pkinase 1.4e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01790 - - gmx:100779981 1079.7