Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops9g01787 | ATGAGGTTCAGAAGCTTTTTATCCAATGACATTGCTTTAGGCAACTGGGGTGATGAGTCTAATTTGTGCAACTGGGCTGGTTTGTTATGTAACAACCAGACATTTTATGGCTTGAGACTAGAGAATATGGGACTAGGTGGGAAGGTTGATGTAGACACCTTGTTGGAATTGTCAAATTTGATAAGTTTTAGTGTTAATAACAATGCATTTGAGGGTCCAATGCCTGAATTCAAAAAGCTTGTGAGTTTAAGGGCACTGTTTTTGTCCAATAACAATTTCTCTGGTGAAGTTCCTGATGATGCTTTTGAGGGCATGAATAAGCTTAAAAGGGTAGTCTTGGCAGAAAATGGGTTCACGGGTCATATTCCTAAGTCCCTTGCTAACTTGCCTAGACTTTTGGATTTGGACTTGCATGGGAATAGTTTTGGAGGCAGCATACCAGAATTTCAACAAAAGGATTTCAGGGTGTTTAGTTTATCAAACAACCAATTGGAGGGTCCCATACCAGAAAGCTTAAGCAACCAGGATCCAACTTCATTTGCTGGGAACAAAGGCCTATGTGGAAAACCTGTGAGCCCCTGCAACAAGATCCCCACAAACCGCAGCAAATCTTCAGTTCTTCCCAACCCTTCTCCTCCATCTCATGGAAAGGAAAAGAACCACCACATCCTTATAACTATCCTTGTAGTAGTGGCTGTGGTTGCCTTGGCTTCAATACTAGCACTTCTATTTATCCATAGCCGCCGGAGAAGAAGCTCTCAACCTTTATTAGGTGAGAGGGTAAATCACCAGAACAATGCAGGTTCCAAGGAGGCACATTCCATTGATCTGACAGGTGATTTCAAGAAGGGTGAGCATGGTGAGTTGAACTTTGTTAGGGAAGACAGAGGGGGTTTTGATTTGCAAGACCTGCTTAGGGCCTCAGCTGAGGTTCTTGGCAGTGGAAGTTTTGGGTCCACTTACAAGGCTATGGTTTTGAATGGACCAACTGTGGTTGTGAAGAGATTTAGGCACATGAACAATGTTGTTAAACAAGAGTTCTTTGAGCATATGCAGAAGCTTGGAAGTTTGTCACATCCTAATCTACTCCCTATGTTTGCATTCTACTATAGGAAAGAAGAGAAGTTTTTGGTTTATGACTTTTGTGAAAATGACAGTCTGGCCAATCATCTACATGGTAGAAATGGTTCTGTTCTAAACTGGTCAACTCGTTTGAAAATAATAAAAGGAGTAGCCAGGGGCTTAGCTTATCTCTACAAAGAGTTCCCTGGACAAAACCTACCTCATGGACATCTTAAATCCTCCAATGTGGTATTGGACCATTCATTTGAGCCACGTTTGACAGGGTATGGACTTATACCAGTGATGAACAAGAGCCATGCTCAACAGTACATGGCATCATACAAGTCCCCAGAGGTGAACCAGTTTGACAGACCCAATGAGAAAACAGACGTTTGGTGTCTAGGGATCCTCATACTAGAACTTTTGACAGGGAAGTTCCCAGCAAATTATCTAAGACATGGGAAAGGTGCAAATGCTGATTTGGCAACATGGGTGAACTCAGTTGTGAGGGAAGAGTGGACAGGTGAGGTGTTTGATAAAGACATCTTGGGTACAAGGAATGGTGAAGGTGAGATGTTGAAGTTGTTGAGGATTGGGATGTATTGTTGTGAATGGGATGTAGAGAGTAGGTGGGATTGGAGAGAGGCTGTGGCAAAGATTGAGGAGCTTAAGGAGAGGGATAGTGAAGATGAATACTCTTCTTATGTTAGTGAAGGAGATTTGTACTCAAAGACTATGACTGAAGATGACCTCTCTTTCTCTATCACTGACTCAAGGGTTGATTAG | 1848 | 0.4242 | MRFRSFLSNDIALGNWGDESNLCNWAGLLCNNQTFYGLRLENMGLGGKVDVDTLLELSNLISFSVNNNAFEGPMPEFKKLVSLRALFLSNNNFSGEVPDDAFEGMNKLKRVVLAENGFTGHIPKSLANLPRLLDLDLHGNSFGGSIPEFQQKDFRVFSLSNNQLEGPIPESLSNQDPTSFAGNKGLCGKPVSPCNKIPTNRSKSSVLPNPSPPSHGKEKNHHILITILVVVAVVALASILALLFIHSRRRRSSQPLLGERVNHQNNAGSKEAHSIDLTGDFKKGEHGELNFVREDRGGFDLQDLLRASAEVLGSGSFGSTYKAMVLNGPTVVVKRFRHMNNVVKQEFFEHMQKLGSLSHPNLLPMFAFYYRKEEKFLVYDFCENDSLANHLHGRNGSVLNWSTRLKIIKGVARGLAYLYKEFPGQNLPHGHLKSSNVVLDHSFEPRLTGYGLIPVMNKSHAQQYMASYKSPEVNQFDRPNEKTDVWCLGILILELLTGKFPANYLRHGKGANADLATWVNSVVREEWTGEVFDKDILGTRNGEGEMLKLLRIGMYCCEWDVESRWDWREAVAKIEELKERDSEDEYSSYVSEGDLYSKTMTEDDLSFSITDSRVD* | 616 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops9g01787 | 615 | Gene3D | Phosphorylase Kinase; domain 1 | 275 | 381 | - | - | |
Rops9g01787 | 615 | Pfam | Protein kinase domain | 309 | 571 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops9g01787 | 615 | Pfam | Leucine rich repeat | 82 | 141 | IPR001611 | GO:0005515 | |
Rops9g01787 | 615 | FunFam | Pollen receptor-like kinase 1 | 382 | 588 | - | - | |
Rops9g01787 | 615 | Gene3D | Ribonuclease Inhibitor | 155 | 194 | IPR032675 | - | |
Rops9g01787 | 615 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 | 3 | 583 | IPR046959 | - | |
Rops9g01787 | 615 | FunFam | LRR receptor-like serine/threonine-protein kinase ERECTA | 51 | 146 | - | - | |
Rops9g01787 | 615 | ProSitePatterns | Protein kinases ATP-binding region signature. | 312 | 334 | IPR017441 | GO:0005524 | |
Rops9g01787 | 615 | Gene3D | Ribonuclease Inhibitor | 3 | 152 | IPR032675 | - | |
Rops9g01787 | 615 | Gene3D | Transferase(Phosphotransferase) domain 1 | 382 | 598 | - | - | |
Rops9g01787 | 615 | ProSiteProfiles | Protein kinase domain profile. | 306 | 577 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops9g01787 | 615 | SUPERFAMILY | L domain-like | 16 | 174 | - | - | |
Rops9g01787 | 615 | MobiDBLite | consensus disorder prediction | 192 | 218 | - | - | |
Rops9g01787 | 615 | MobiDBLite | consensus disorder prediction | 195 | 211 | - | - | |
Rops9g01787 | 615 | SUPERFAMILY | Protein kinase-like (PK-like) | 310 | 578 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops9g01787 | Rops-Chr9 | 31986823 | 31990099 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops9g01787 | 12 | 608 | Receptor kinase-like Gene Family | AT5G35390 | 48.392 | 0.0 | 554 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-III | Rops9g01787 | Pkinase | 1.8e-29 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops9g01787 | - | - | gmx:100781593 | 946.036 |