Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01787 ATGAGGTTCAGAAGCTTTTTATCCAATGACATTGCTTTAGGCAACTGGGGTGATGAGTCTAATTTGTGCAACTGGGCTGGTTTGTTATGTAACAACCAGACATTTTATGGCTTGAGACTAGAGAATATGGGACTAGGTGGGAAGGTTGATGTAGACACCTTGTTGGAATTGTCAAATTTGATAAGTTTTAGTGTTAATAACAATGCATTTGAGGGTCCAATGCCTGAATTCAAAAAGCTTGTGAGTTTAAGGGCACTGTTTTTGTCCAATAACAATTTCTCTGGTGAAGTTCCTGATGATGCTTTTGAGGGCATGAATAAGCTTAAAAGGGTAGTCTTGGCAGAAAATGGGTTCACGGGTCATATTCCTAAGTCCCTTGCTAACTTGCCTAGACTTTTGGATTTGGACTTGCATGGGAATAGTTTTGGAGGCAGCATACCAGAATTTCAACAAAAGGATTTCAGGGTGTTTAGTTTATCAAACAACCAATTGGAGGGTCCCATACCAGAAAGCTTAAGCAACCAGGATCCAACTTCATTTGCTGGGAACAAAGGCCTATGTGGAAAACCTGTGAGCCCCTGCAACAAGATCCCCACAAACCGCAGCAAATCTTCAGTTCTTCCCAACCCTTCTCCTCCATCTCATGGAAAGGAAAAGAACCACCACATCCTTATAACTATCCTTGTAGTAGTGGCTGTGGTTGCCTTGGCTTCAATACTAGCACTTCTATTTATCCATAGCCGCCGGAGAAGAAGCTCTCAACCTTTATTAGGTGAGAGGGTAAATCACCAGAACAATGCAGGTTCCAAGGAGGCACATTCCATTGATCTGACAGGTGATTTCAAGAAGGGTGAGCATGGTGAGTTGAACTTTGTTAGGGAAGACAGAGGGGGTTTTGATTTGCAAGACCTGCTTAGGGCCTCAGCTGAGGTTCTTGGCAGTGGAAGTTTTGGGTCCACTTACAAGGCTATGGTTTTGAATGGACCAACTGTGGTTGTGAAGAGATTTAGGCACATGAACAATGTTGTTAAACAAGAGTTCTTTGAGCATATGCAGAAGCTTGGAAGTTTGTCACATCCTAATCTACTCCCTATGTTTGCATTCTACTATAGGAAAGAAGAGAAGTTTTTGGTTTATGACTTTTGTGAAAATGACAGTCTGGCCAATCATCTACATGGTAGAAATGGTTCTGTTCTAAACTGGTCAACTCGTTTGAAAATAATAAAAGGAGTAGCCAGGGGCTTAGCTTATCTCTACAAAGAGTTCCCTGGACAAAACCTACCTCATGGACATCTTAAATCCTCCAATGTGGTATTGGACCATTCATTTGAGCCACGTTTGACAGGGTATGGACTTATACCAGTGATGAACAAGAGCCATGCTCAACAGTACATGGCATCATACAAGTCCCCAGAGGTGAACCAGTTTGACAGACCCAATGAGAAAACAGACGTTTGGTGTCTAGGGATCCTCATACTAGAACTTTTGACAGGGAAGTTCCCAGCAAATTATCTAAGACATGGGAAAGGTGCAAATGCTGATTTGGCAACATGGGTGAACTCAGTTGTGAGGGAAGAGTGGACAGGTGAGGTGTTTGATAAAGACATCTTGGGTACAAGGAATGGTGAAGGTGAGATGTTGAAGTTGTTGAGGATTGGGATGTATTGTTGTGAATGGGATGTAGAGAGTAGGTGGGATTGGAGAGAGGCTGTGGCAAAGATTGAGGAGCTTAAGGAGAGGGATAGTGAAGATGAATACTCTTCTTATGTTAGTGAAGGAGATTTGTACTCAAAGACTATGACTGAAGATGACCTCTCTTTCTCTATCACTGACTCAAGGGTTGATTAG 1848 0.4242 MRFRSFLSNDIALGNWGDESNLCNWAGLLCNNQTFYGLRLENMGLGGKVDVDTLLELSNLISFSVNNNAFEGPMPEFKKLVSLRALFLSNNNFSGEVPDDAFEGMNKLKRVVLAENGFTGHIPKSLANLPRLLDLDLHGNSFGGSIPEFQQKDFRVFSLSNNQLEGPIPESLSNQDPTSFAGNKGLCGKPVSPCNKIPTNRSKSSVLPNPSPPSHGKEKNHHILITILVVVAVVALASILALLFIHSRRRRSSQPLLGERVNHQNNAGSKEAHSIDLTGDFKKGEHGELNFVREDRGGFDLQDLLRASAEVLGSGSFGSTYKAMVLNGPTVVVKRFRHMNNVVKQEFFEHMQKLGSLSHPNLLPMFAFYYRKEEKFLVYDFCENDSLANHLHGRNGSVLNWSTRLKIIKGVARGLAYLYKEFPGQNLPHGHLKSSNVVLDHSFEPRLTGYGLIPVMNKSHAQQYMASYKSPEVNQFDRPNEKTDVWCLGILILELLTGKFPANYLRHGKGANADLATWVNSVVREEWTGEVFDKDILGTRNGEGEMLKLLRIGMYCCEWDVESRWDWREAVAKIEELKERDSEDEYSSYVSEGDLYSKTMTEDDLSFSITDSRVD* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01787 615 Gene3D Phosphorylase Kinase; domain 1 275 381 - -
Rops9g01787 615 Pfam Protein kinase domain 309 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01787 615 Pfam Leucine rich repeat 82 141 IPR001611 GO:0005515
Rops9g01787 615 FunFam Pollen receptor-like kinase 1 382 588 - -
Rops9g01787 615 Gene3D Ribonuclease Inhibitor 155 194 IPR032675 -
Rops9g01787 615 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 3 583 IPR046959 -
Rops9g01787 615 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 51 146 - -
Rops9g01787 615 ProSitePatterns Protein kinases ATP-binding region signature. 312 334 IPR017441 GO:0005524
Rops9g01787 615 Gene3D Ribonuclease Inhibitor 3 152 IPR032675 -
Rops9g01787 615 Gene3D Transferase(Phosphotransferase) domain 1 382 598 - -
Rops9g01787 615 ProSiteProfiles Protein kinase domain profile. 306 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01787 615 SUPERFAMILY L domain-like 16 174 - -
Rops9g01787 615 MobiDBLite consensus disorder prediction 192 218 - -
Rops9g01787 615 MobiDBLite consensus disorder prediction 195 211 - -
Rops9g01787 615 SUPERFAMILY Protein kinase-like (PK-like) 310 578 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01787 Rops-Chr9 31986823 31990099 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01787 12 608 Receptor kinase-like Gene Family AT5G35390 48.392 0.0 554
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Rops9g01787 Pkinase 1.8e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01787 - - gmx:100781593 946.036