Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01778 ATGTCCATGGATTCAAAGAAATCTAACAAGATCAGAGAAATTGTTAGACTTCAACAGATCCTTAAGAAATGGAGAAGGATAGCCAACTCTTCAAAAACCACCACCACCAACAACAACAACAATGGCAGCAGTAGCAGTAAAAGCATCAAGTTTCTGAAAAGAACACTCTCTCTATCTGAACGTGAAGGAGGATCAAGCAATGCTGTTCCCAAAGGCTACCTAGCTGTTTGTGTTGGAGAAGAGCTTAAGAGGTTCATCATACCAACTGAATATTTGGGTCATGAGGCCTTTCAGATCCTCTTGAGAGAAGCAGAAGAAGAATTTGGGTTTCAACAAACAGGTGTTTTGAGGATTCCTTGTGAAGTTTCAGTTTTTGAGGGTATCTTGAAGATGGTGGATGGTAAGAAGGACAAGTTTTCCACTCAAGAATGTAGACTTAGCATTGAAGAGATGATGGGATATTGCTCTTTAGAAAACCAACTTGCTTATTCTCACCATCCTCAAAGTCCATTGTGCAGATAG 522 0.4004 MSMDSKKSNKIREIVRLQQILKKWRRIANSSKTTTTNNNNNGSSSSKSIKFLKRTLSLSEREGGSSNAVPKGYLAVCVGEELKRFIIPTEYLGHEAFQILLREAEEEFGFQQTGVLRIPCEVSVFEGILKMVDGKKDKFSTQECRLSIEEMMGYCSLENQLAYSHHPQSPLCR* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01778 173 MobiDBLite consensus disorder prediction 28 47 - -
Rops9g01778 173 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 47 127 IPR003676 GO:0009733
Rops9g01778 173 Pfam Auxin responsive protein 23 132 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01778 Rops-Chr9 31815134 31815655 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01778 3 173 Calmodulin-binding Proteins AT4G31320 52.577 2.16e-60 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01778 K14488 - gmx:100799598 280.796