Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01775 ATGGAACCTAAGTGGGGCGGCGTTCTGGCGGCGGCGTCAATTTACTCCGGCTTCGAAGACCTGAAGTGGATCACGTCGGAGTTCGATCAAGAAGTGTTCACAAAGCGGATGGCCGAAGGAGTCGAAACAGCCAACGGATCGGTGAACGACGACGGCGACGACAACGACTTTAAACAGTGCAAGGTGGATCCATTCACCTGCGGCGGTGGCGGTGTTTTCTCCAGTAACCTCAACGGCGGCGCCACTTATTTTCAAAATCTGGATGAGGTAACTGCATTTTCAACTTGTGGTGGTGAACTAGCAGATAACACCCTCGTCGGCTCACAAAACCTCACTCCCAAGCATTCCACCATCTCTGCAACTATTGATTCGCAGTCATCCATTTGTGGTACAGTTACCAGCCCCGTGTCTGCTAATAAACCAAACAGCAGAGATAATCAAGCCAAAGGAGTCACTACAAGTGGTTCCTCACGTGAGCCATCTGATGAGGATGATGAAGCAGGTCCTTGTGAACAAAGCACAAACCCTATTGATATGAGGCGCCTTAGAAGGAAGGTTTCTAATCGCGAGTCTGCAAAGAGGTCCAGAAGAAGAAAACAAGCGCATTTGGCTGAAGTGGAGTTGCAGGTTGAACAGCTGAGGCTGGAAAATGCAACCCTATATAAGCAGTTTACAGATGCGAACCAACAGTTTCGTGAGGCTGACACGAATAACCGAGTGCTAAAATCAGATGTGGAAGCTTTGAGAGCTAAGGTGAAGTTAGCGGAGGATATGGTCACTCGGGGTTCTTTCACTTTGAACAACCAGCTTCTCCAAAATCATAATCAATTGAGCACCCCACCACAAGTCAACACGAGTTGCCTCGGCCGCATGGCACACGTGTCGCCCTCCATCACCGTCCATGGGAATGATGTTTCATATGGTAGTGGTATCACAATTGGTGGACAGAATTCAACTCTTGGACTTGGAGACTTTGATATAACTTGCAGCAATTTCAACAATGGAGTCAATAGTGATGCTGTGAGCTCTATGACTAGTATATGGCCTTAA 1050 0.481 MEPKWGGVLAAASIYSGFEDLKWITSEFDQEVFTKRMAEGVETANGSVNDDGDDNDFKQCKVDPFTCGGGGVFSSNLNGGATYFQNLDEVTAFSTCGGELADNTLVGSQNLTPKHSTISATIDSQSSICGTVTSPVSANKPNSRDNQAKGVTTSGSSREPSDEDDEAGPCEQSTNPIDMRRLRRKVSNRESAKRSRRRKQAHLAEVELQVEQLRLENATLYKQFTDANQQFREADTNNRVLKSDVEALRAKVKLAEDMVTRGSFTLNNQLLQNHNQLSTPPQVNTSCLGRMAHVSPSITVHGNDVSYGSGITIGGQNSTLGLGDFDITCSNFNNGVNSDAVSSMTSIWP* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01775 349 PANTHER BASIC LEUCINE ZIPPER 63 104 329 - -
Rops9g01775 349 MobiDBLite consensus disorder prediction 132 157 - -
Rops9g01775 349 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 183 198 IPR004827 GO:0003700|GO:0006355
Rops9g01775 349 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 178 241 IPR004827 GO:0003700|GO:0006355
Rops9g01775 349 MobiDBLite consensus disorder prediction 132 201 - -
Rops9g01775 349 Coils Coil 238 258 - -
Rops9g01775 349 Gene3D - 179 235 - -
Rops9g01775 349 SMART brlzneu 176 240 IPR004827 GO:0003700|GO:0006355
Rops9g01775 349 CDD bZIP_plant_GBF1 181 232 IPR045314 GO:0003700|GO:0006355
Rops9g01775 349 Pfam bZIP transcription factor 179 226 IPR004827 GO:0003700|GO:0006355
Rops9g01775 349 FunFam BZIP transcription factor 178 229 - -
Rops9g01775 349 SUPERFAMILY Leucine zipper domain 180 230 IPR046347 GO:0003700|GO:0006355
Rops9g01775 349 Coils Coil 196 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01775 Rops-Chr9 31655949 31659826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01775 123 349 bZIP Transcription Factor Family AT5G24800 53.648 1.79e-65 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Rops9g01775 bZIP_1 5.8e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01775 K25784 - gmx:778193 389.808