Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01704 ATGGATAGGGTAGTTGGAGGAAAGTATAAAATAGGTCGGAAAATTGGGAGCGGATCGTTCGGTGAAATTCATATTGGGGCGAATATCGAGACCTCTGAGATTGTGGCCATCAAGATGGAGAACAGGAAAACCAAAAATCCGCAGCTGCTGTATGAGGCTAAGTTATATAATAATCTTCAAGGTGGAAGTGGTATTCCAAGAATTAAATGGTGTGGTACTCATGGAGACAATAATGTTCTAGTTCTTGAACTTCTGGGACCGAGTCTTGAAGACCTCTTTTTCTTCTGTGGTGGGAAGTTTTCACTAAAAACAGTTTTGATGTTGGCTGATCAGATGCTTACGAGGATAGAGTATTTACATTCCAAGGGAATCCTGCACAGAGATATCAAACCAGATAACTTCCTTATGGGTCTTGGGAAGAAAGCAAAACAGGTTTTTATGATTGACTTTGGACTTTCAAAAGGATATAGGGACTCTAACACAAACAGGCATATCCCATACAGAGAGAACAAAAACTTAACAGGGACTGCACGTTATGCAAGTTGCAACACCCACAAAGGAATTGAGCAAAGTCGTCGAGATGATTTGGAGTCTCTTGGCTATGTTCTTATGTACTTTTTAAGAGGAAGCCTTCCTTGGCAGGGTCTGCAAGCTGCCAACAAAATGCAAAAATATGACAAAATTTGTGAAAAGAAGTTATCAACTTCCATTGAGGTACTTTGCAAGTCTTATCCTCTGGAGTTCGCTTCTTACTTTCATTATTGCCGCTCTTTGAAATTTGATCAACGGCCAGATTATGGGTTTTTGAAGCGCCTGTTTCACAATTTGTTCACTAGTGAAGGATATGATTCTGACTATTTATTTGACTGGACGATTCTAAAATATCAGCAAATCCAACAGACAAAGGCTCAAAGTCAATCAACTGCTCCAGTTGCCGTGCCTAGCAGCCTTGAACCAGTGGATGTGGATAAGCATGAAGAAGTCAATGACTCCACTCAAATTGCTGTGGCAAGACCATCAATCAATTATGATCGTCCACGTGTTTCTATGAAGATCAGGGCATCTAATGTGCAGAATCATACTGCCAAGATTCAGACACAGAAACATACTGTGAACAATGGTTCATCTATTTTGACTGCCATGCCCAGAGTCTCTCCAGAAAATGTCGCAAAACCAGAAAGGCCTATAGGAACCTCGAATCCTGGTTGTGTATTTGGAAGTAAACCTGGTGCTTCAGGCAGCTTTGTTCCTTCACTACGCCGAGTTTCATCAACCAAGTAA 1281 0.4106 MDRVVGGKYKIGRKIGSGSFGEIHIGANIETSEIVAIKMENRKTKNPQLLYEAKLYNNLQGGSGIPRIKWCGTHGDNNVLVLELLGPSLEDLFFFCGGKFSLKTVLMLADQMLTRIEYLHSKGILHRDIKPDNFLMGLGKKAKQVFMIDFGLSKGYRDSNTNRHIPYRENKNLTGTARYASCNTHKGIEQSRRDDLESLGYVLMYFLRGSLPWQGLQAANKMQKYDKICEKKLSTSIEVLCKSYPLEFASYFHYCRSLKFDQRPDYGFLKRLFHNLFTSEGYDSDYLFDWTILKYQQIQQTKAQSQSTAPVAVPSSLEPVDVDKHEEVNDSTQIAVARPSINYDRPRVSMKIRASNVQNHTAKIQTQKHTVNNGSSILTAMPRVSPENVAKPERPIGTSNPGCVFGSKPGASGSFVPSLRRVSSTK* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01704 426 PANTHER CASEIN KINASE-RELATED 7 334 - -
Rops9g01704 426 Gene3D Transferase(Phosphotransferase) domain 1 1 340 - -
Rops9g01704 426 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Rops9g01704 426 ProSiteProfiles Protein kinase domain profile. 9 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01704 426 MobiDBLite consensus disorder prediction 388 426 - -
Rops9g01704 426 Pfam Protein kinase domain 9 225 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01704 426 SMART serkin_6 9 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01704 426 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Rops9g01704 426 FunFam CK1 family protein kinase 1 336 - -
Rops9g01704 426 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01704 Rops-Chr9 29938361 29946073 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01704 4 228 CBL-interacting serine-threonine protein kinases AT4G14580 27.966 2.56e-15 75.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Rops9g01704 Pkinase 2.4e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01704 K08960 K08959 gmx:100782913 669.077