Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01703 ATGGCCAAAATCGCCTTAGGAACCACCCGAGAGGCCACTCAGCTGGATTGCATTCAGGCTCTAGTTGTTGAATTCATCGCCACCTTTCTCTTTGTCTTTGTTGGTGTTGGTTCTGCCATGGCGGCTGATAAGCTAAGTGGAGGCCCACTAGAGAGCTTGTTTGTCGTGGCCGTGGCACATGCACTTGTGGTGGCTGTGATGATTTCCGCCGCTCACATTTCCGGTGGCCACCTGAATCCCGCCGTGACCCTCGGCCTCCTTGTTGGCGGCCACATCACCCTCGTCCGTTCCATCCTATATTGGATTGATCAATTGATAGCATCTTCAGCAGCATGTTATCTTCTGTTTTATCTCTCAGGGGGAATGACAACTCCAGTTCACACGCTTTCAAGTGGAGTAGGGTTCGGTCAGGGAGTGGTTTGGGAGATTGTGTTGACATTTTCTTTGTTGTTCACTGTTTATGCAACCATGGTTGATCCCAAGAAGGGAGCACTTGCTGGGCTTGGACCAACCCTTGTTGGGTTTGTAGTTGGGGCTAACATTCTAGCTGGTGGTGCATTCTCTGCTGCTTCCATGAACCCAGCAAGATCCTTTGGGCCTGCTTTGGTTAGTGGAAACTGGACTGATCATTGGGTTTATTGGGTGGGACCACTCATAGGGGGTGGCCTTGCTGGTTTCATCTATGAGAGTTTCTTCATTAACAGAGCTCATGTTCCTATAGTTGAAGAGAGCTTCTAA 738 0.4973 MAKIALGTTREATQLDCIQALVVEFIATFLFVFVGVGSAMAADKLSGGPLESLFVVAVAHALVVAVMISAAHISGGHLNPAVTLGLLVGGHITLVRSILYWIDQLIASSAACYLLFYLSGGMTTPVHTLSSGVGFGQGVVWEIVLTFSLLFTVYATMVDPKKGALAGLGPTLVGFVVGANILAGGAFSAASMNPARSFGPALVSGNWTDHWVYWVGPLIGGGLAGFIYESFFINRAHVPIVEESF* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01703 245 ProSitePatterns MIP family signature. 77 85 IPR022357 -
Rops9g01703 245 PRINTS Major intrinsic protein family signature 19 38 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops9g01703 245 PRINTS Major intrinsic protein family signature 96 115 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops9g01703 245 PRINTS Major intrinsic protein family signature 174 196 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops9g01703 245 PRINTS Major intrinsic protein family signature 141 159 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops9g01703 245 PRINTS Major intrinsic protein family signature 59 83 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops9g01703 245 PRINTS Major intrinsic protein family signature 211 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops9g01703 245 SUPERFAMILY Aquaporin-like 11 239 IPR023271 -
Rops9g01703 245 PANTHER AQUAPORIN-8 4 235 IPR034294 -
Rops9g01703 245 Pfam Major intrinsic protein 12 228 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops9g01703 245 CDD MIP 19 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops9g01703 245 FunFam Probable aquaporin TIP1-1 2 244 - -
Rops9g01703 245 Gene3D Glycerol uptake facilitator protein. 2 242 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01703 Rops-Chr9 29925434 29927657 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01703 1 244 Major Intrinsic Protein MIP AT2G25810 76.639 4.18e-127 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01703 K09873 - gmx:100811447 423.32