Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01701 ATGGCCAAAATCGCCTTAGGAACCACCCGAGAGGCCACTCAGCTGGATTGCATTCAGGCTCTAGTTGTTGAATTCATCGCCACCTTTCTCTTTGTCTTTGTTGGTGTTGGTTCTGCCATGGCGGCTGATAAGCTAAGTGGAGGCCCACTAGAGAGCTTGTTTGTCGTGGCCGTGGCACATGCACTTCTGGTGGCTGTGATGATTTCCGCCGGTCACATTTCTGGTGGCCACCTGAATCCCGCCGTGACCCTCGGCCTCCTTGTCGGCGGCCACATCACAGTCGTCCGTTCCATCCTATATTGGATTGATCAATTGATAGCATCTTCAGCAGCATGTTATCTTCTGTTTTATCTCTCAGGGGGGATGACAACTCCAGTTCACACGCTTTCAAGTGGAGTAGGGTTCGGTCAGGGAGTGGTTTGGGAGATTGTGTTGACATTTTCTTTGTTGTTCACTGTTTATGCAACCATGGTTGATCCCAAGAAGGGAGCATCTGCTGGGCTTGGACCAACCCTTGTTGGGTTTGTAGTTGGGGCTAACATCCTAGCTGGTGGTGCATTCTCTGCTGCTTCCATGAACCCAGCAAGATCCTTTGGGCCTGCTTTGGTTAGTGGAAACTGGACTGATCATTGGGTTTATTGGGTGGGACCACTCATAGGGGGTGGCCTTGCTGGTTTCATCTATGAGAGTTTCTTCATTGACAGAGCTCATGTTCCTATAATTGAAGAGAGCTTCTAA 738 0.4986 MAKIALGTTREATQLDCIQALVVEFIATFLFVFVGVGSAMAADKLSGGPLESLFVVAVAHALLVAVMISAGHISGGHLNPAVTLGLLVGGHITVVRSILYWIDQLIASSAACYLLFYLSGGMTTPVHTLSSGVGFGQGVVWEIVLTFSLLFTVYATMVDPKKGASAGLGPTLVGFVVGANILAGGAFSAASMNPARSFGPALVSGNWTDHWVYWVGPLIGGGLAGFIYESFFIDRAHVPIIEESF* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01701 245 Gene3D Glycerol uptake facilitator protein. 2 242 IPR023271 -
Rops9g01701 245 SUPERFAMILY Aquaporin-like 11 240 IPR023271 -
Rops9g01701 245 ProSitePatterns MIP family signature. 77 85 IPR022357 -
Rops9g01701 245 PANTHER AQUAPORIN-8 4 235 IPR034294 -
Rops9g01701 245 Pfam Major intrinsic protein 12 228 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops9g01701 245 FunFam Probable aquaporin TIP1-1 2 244 - -
Rops9g01701 245 CDD MIP 19 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops9g01701 245 PRINTS Major intrinsic protein family signature 19 38 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops9g01701 245 PRINTS Major intrinsic protein family signature 59 83 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops9g01701 245 PRINTS Major intrinsic protein family signature 96 115 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops9g01701 245 PRINTS Major intrinsic protein family signature 174 196 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops9g01701 245 PRINTS Major intrinsic protein family signature 141 159 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops9g01701 245 PRINTS Major intrinsic protein family signature 211 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01701 Rops-Chr9 29889550 29891745 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01701 1 244 Major Intrinsic Protein MIP AT2G25810 77.049 1.32e-127 359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01701 K09873 - gmx:100811447 420.624