Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01693 ATGAGAATTTCATCCCAGAATTCCGAAGCTGAGAGCAGCTCAAACTCATTCCCATCCCCATCCCCACCAACTTCACCTTCCTCGAACTCTCTCTCCAAGAAGGCAAAACGCAACCGAGACTCCAACAAACACCCTGTGTACAGAGGAGTTCGCATGCGAAACTGGGGCAAGTGGGTGTCCGAAATCCGTGAACCTCGCAAGAAATCCCGCATATGGCTCGGCACGTTCCCAACCCCGGAAATGGCAGCGAGGGCGCATGACGTGGCGGCACTGAGCATTAAGGGAAGCTCTGCTGTTCTCAATTTTCCTCACCTTGCCAACTCTCTCCCTAGACCAGCATCATTAGCCCCTCGTGATGTTCAAGAGGCTGCAGCCAAAGCAGCTCAAATGGAAAAGTTTGAATTGCCAACATCATCATCATTGGCTTCGACCACGTTGTCCTCCTCGTCTTCTTCTCTGTCCTCCTTGGTTTCCCCAATGGACTTGTCCACTGCATCTGAGGAACTGAGTGAGATCATAGAGCTTCCCAGGTTGGAAACTGGTTACGAGGTGGGGAACGAGTTTCTGCTCGTTGACTTGCAAGACGCGTGGATGTATCAACCACCAATCCCGTGGTTACAGAGCATGCAAGATGGTTGTGATGATAGTTACCCTGCTGAAGAATTTTCAGTGCAGGAGAATAATGGGGTGGGAACTAGTTTTGAGAGTTTTCTGTGGAATTACTGA 726 0.5028 MRISSQNSEAESSSNSFPSPSPPTSPSSNSLSKKAKRNRDSNKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGSSAVLNFPHLANSLPRPASLAPRDVQEAAAKAAQMEKFELPTSSSLASTTLSSSSSSLSSLVSPMDLSTASEELSEIIELPRLETGYEVGNEFLLVDLQDAWMYQPPIPWLQSMQDGCDDSYPAEEFSVQENNGVGTSFESFLWNY* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01693 241 Pfam AP2 domain 45 95 IPR001471 GO:0003700|GO:0006355
Rops9g01693 241 MobiDBLite consensus disorder prediction 1 47 - -
Rops9g01693 241 ProSiteProfiles AP2/ERF domain profile. 46 103 IPR001471 GO:0003700|GO:0006355
Rops9g01693 241 SUPERFAMILY DNA-binding domain 46 104 IPR016177 GO:0003677
Rops9g01693 241 CDD AP2 47 105 IPR001471 GO:0003700|GO:0006355
Rops9g01693 241 SMART rav1_2 46 109 IPR001471 GO:0003700|GO:0006355
Rops9g01693 241 MobiDBLite consensus disorder prediction 1 18 - -
Rops9g01693 241 Gene3D AP2/ERF domain 46 104 IPR036955 GO:0003700|GO:0006355
Rops9g01693 241 PRINTS Ethylene responsive element binding protein signature 47 58 IPR001471 GO:0003700|GO:0006355
Rops9g01693 241 PRINTS Ethylene responsive element binding protein signature 69 85 IPR001471 GO:0003700|GO:0006355
Rops9g01693 241 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 26 180 - -
Rops9g01693 241 FunFam Ethylene-responsive transcription factor 2 45 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01693 Rops-Chr9 29744423 29745506 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01693 33 211 AP2-EREBP Transcription Factor Family AT5G11590 68.108 6.26e-71 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Rops9g01693 AP2 2.8e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01693 K09286 - gmx:100305349 271.552