Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops9g01683 | ATGGCCAAAGGAACTCCAACGTTTCCAAAGTCCCTAACGTTTGTGTGCCTTGTCATGTTCATGTTCAACTTCCACTTATCACAAGGGGAAGAAGAACTTGATCTTCTGTTGTCTTTCAAATCTTCCATCCATGATGATCCACTTCACTTTCTCTCTAACTGGGTCAACTCCTCCGCCACTATTTGCAAGTGGCATGGCATCACATGTGACAACTCCTCCCATGTTAACAACATTGATCTTTCAGGTAAAAACATATCTGGCAATATTTCCTCATCCATATTTCAACTTTCAAATGTTACAACCATTGACCTCTCAAACAACCAGCTTGTTGGGGAAATAGTCCCAAACTCTCTTTCTGTCTCATTACTTCGTTACCTCAATCTTAGCAATAACAATCTCACAGGTTCATTGCCACAAATTCTGTTTTCCCTTTCTTTTCCTCACCTCGAAACTCTTGATCTCTCGAACAACATGTTTTCCGGGAAAATACCAGACCAAATTGGATTGCTATCAAATCTTGTATATCTTGATCTTGGGGGCAACTTTTTGGTGGGAAAAATTCCAAATTCCATCACCAACATGACTTGTTTGCAATACTTGACCTTGGCTTCAAACCAATTGGTGGGAGAAATACCACTAGAGATTGGCTTAATGAAGAGCTTGAAATGGATCTACTTTGGTTTCAATAACCTCTCTGGTGAGATACCAAGTGGCATTGGAGAATTATTTTCTTTAAATCACCTTGATCTTGTTTACAACAATCTCACTGGACAAATTCCTGAATCTCTTGGAAACCTCACTGAACTTCAGTATCTCTTTCTCTATCAAAACAACCTTATAGGTCCAATTCCTCGATCTATTTTCCGACTAAAAAAGCTTATCTCACTTGATCTCAGTGATAACTCGCTTTCAGGTGAGATTTCTGAGCTTGTGATTCAACTCCAGAGACTAGAGATACTTCATCTTTTCTCCAACAACTTCACAGGAAAGATTCCAAAAGCTTTAACCTCTTTGTCTCGGCTCCAAGTCCTTCAGCTTTGGTCAAACAAATTAACAGGTGAGATTCCAGAGCAACTTGGAAAGCACAACAACCTCACTGTATTGGACCTATCCACCAACAACCTTTCTGGGAAAATCCCAGATACTTTATGTGACTCTGGCAATCTTTACAAACTCATCCTCTTTTCAAACTCTTTCCAAGGAGAAATCCCAAAATGCTTAAGCTCTTGTAGAAGCATACGCCGAATGCGTCTCCAAAACAACAAGCTTTCAGGGGAACTACCAAAACAGTTAACCAAATTGCCTCATATTTACTTCTTGGATATCTCTGGCAATAAACTCTCTGGAAGGATCGATGACAGAAAATGGGACATGCCAGCACTTCAAATGTTTAGTTTGGCTCACAATAACTTCTCAGGGGAGTTACCAAACTTGTTCGGGGGGAGTGAAAAACTGGAGAATTTGGACTTATCAGATAATCAGTTTTCTGGTTATATTCAACCTAGTTTTGGGAACTTGTCAGAGGTCATGCAATTGAAGCTTAGCAATAACAAGCTTTTTGGTAACATCCCAGGAGAACTCTGTTTGTGCAAGAAGCTTGTGACTTTAGACCTCAGCCAGAACCAGCTCACAGGGAAAATTCCGATTATGCTTGCTGAGTTACCAGTTCTTGGACAATTGGATTTGTCAGTAAACCAATTTTCTGGAGAAATTCCAAAGAATTTAGCAAGTGTGGAATCTCTTGTTGAGGTAAACATATCCCATAACCATTTCCATGGAAGTTTACCTTCCACTGGTGCTTTCCTTGCCATAAAGGCAAGTGCAGTTACAGGAAACGAGCTTTGTGAAAGTGATAATCATCCTTCAAGTGGTTTGCCACCATGCAAAGGTGATCAAAACCCAACTTGGTGGTTTATTCTACTCTGTTTTCTAGTGGGGTTGGCAGCATTTGTTGTGGTTGCTTTTCTCATCGTTATTATCCGCAGAAGAAAGCATTTGGAACCAACAAGATTGGAGAAAGAAAATGGCACGTGGGAAATGCAACTTTTTGATCCGAAAGTCTCGAAATGGATCACCATCGATGATGTTTTGTCTTCAGCAAAAGAAGAAAATGTAATTTCCAGAGGAAGGAACTGGGTCTCGTATGAAGGGAAGTGCATTGCCAATGACATGAAGTTCATGGTGGATGAAATCAGTGACACAAATTCAGTTCCACTTAGCTATTGGGAGGACATGGTGGAGTTGGGTAAGGTTCAGCACCCAAACATAGTTAAGTTGATTGGAATATGTAGGTATGGTAAGGGAGGATACTTGGTGTATGAGCATTCAGAAGGAAAGAATTTGAGCCAAGTTTTGAGGAATATGAGTTGGGAACGGAGGCGAAAAATAGTCTTGGGGATTTCAAAAGCACTGAAATTCTTTCACTTTCATTGTTCGTCCAAGGTTTTGGTTGGGGAGTTAACACCACAGATGGTTCTGGTCGATGCCAAAGACGTGCCTCACCTGAGGCTGTGCCCGGAAGCCCGGGTTTTCATTTCCTCTGCCTATGTTGCCCCAGGTCCTGTGGACATAGAAGCTGACAAGTACGAGAGTGTCGTTGAGTGGGCCCGGTATTGCTACTCTGACTGCCATCTTGACACGTGGATCGACCCCACGATGAAGGGTGGATTTGCATCCACCAATCACAACGACGTCGTTGAGATGATGAACCTCGCCTTGCACTGCACTGCAACAGATCCCACAGCAAGGCCCTGCGCCACCCAAGTACTCAAAACCCTGGAAGCTGTCAACAACAACCACCGCGCACACACTTTTTCATGTGTTTCCTCTTTCTGA | 2835 | 0.4212 | MAKGTPTFPKSLTFVCLVMFMFNFHLSQGEEELDLLLSFKSSIHDDPLHFLSNWVNSSATICKWHGITCDNSSHVNNIDLSGKNISGNISSSIFQLSNVTTIDLSNNQLVGEIVPNSLSVSLLRYLNLSNNNLTGSLPQILFSLSFPHLETLDLSNNMFSGKIPDQIGLLSNLVYLDLGGNFLVGKIPNSITNMTCLQYLTLASNQLVGEIPLEIGLMKSLKWIYFGFNNLSGEIPSGIGELFSLNHLDLVYNNLTGQIPESLGNLTELQYLFLYQNNLIGPIPRSIFRLKKLISLDLSDNSLSGEISELVIQLQRLEILHLFSNNFTGKIPKALTSLSRLQVLQLWSNKLTGEIPEQLGKHNNLTVLDLSTNNLSGKIPDTLCDSGNLYKLILFSNSFQGEIPKCLSSCRSIRRMRLQNNKLSGELPKQLTKLPHIYFLDISGNKLSGRIDDRKWDMPALQMFSLAHNNFSGELPNLFGGSEKLENLDLSDNQFSGYIQPSFGNLSEVMQLKLSNNKLFGNIPGELCLCKKLVTLDLSQNQLTGKIPIMLAELPVLGQLDLSVNQFSGEIPKNLASVESLVEVNISHNHFHGSLPSTGAFLAIKASAVTGNELCESDNHPSSGLPPCKGDQNPTWWFILLCFLVGLAAFVVVAFLIVIIRRRKHLEPTRLEKENGTWEMQLFDPKVSKWITIDDVLSSAKEENVISRGRNWVSYEGKCIANDMKFMVDEISDTNSVPLSYWEDMVELGKVQHPNIVKLIGICRYGKGGYLVYEHSEGKNLSQVLRNMSWERRRKIVLGISKALKFFHFHCSSKVLVGELTPQMVLVDAKDVPHLRLCPEARVFISSAYVAPGPVDIEADKYESVVEWARYCYSDCHLDTWIDPTMKGGFASTNHNDVVEMMNLALHCTATDPTARPCATQVLKTLEAVNNNHRAHTFSCVSSF* | 945 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops9g01683 | 944 | Gene3D | Phosphorylase Kinase; domain 1 | 669 | 775 | - | - | |
Rops9g01683 | 944 | ProSiteProfiles | Leucine-rich repeat profile. | 122 | 144 | IPR001611 | GO:0005515 | |
Rops9g01683 | 944 | FunFam | Leucine-rich repeat receptor-like protein kinase | 29 | 189 | - | - | |
Rops9g01683 | 944 | ProSiteProfiles | Leucine-rich repeat profile. | 148 | 170 | IPR001611 | GO:0005515 | |
Rops9g01683 | 944 | SUPERFAMILY | Protein kinase-like (PK-like) | 703 | 931 | IPR011009 | - | |
Rops9g01683 | 944 | Gene3D | Ribonuclease Inhibitor | 240 | 362 | IPR032675 | - | |
Rops9g01683 | 944 | SMART | LRR_typ_2 | 218 | 242 | IPR003591 | - | |
Rops9g01683 | 944 | SMART | LRR_typ_2 | 146 | 170 | IPR003591 | - | |
Rops9g01683 | 944 | SMART | LRR_typ_2 | 266 | 290 | IPR003591 | - | |
Rops9g01683 | 944 | SMART | LRR_typ_2 | 458 | 481 | IPR003591 | - | |
Rops9g01683 | 944 | SMART | LRR_typ_2 | 364 | 386 | IPR003591 | - | |
Rops9g01683 | 944 | SMART | LRR_typ_2 | 120 | 144 | IPR003591 | - | |
Rops9g01683 | 944 | SMART | LRR_typ_2 | 506 | 530 | IPR003591 | - | |
Rops9g01683 | 944 | SMART | LRR_typ_2 | 338 | 362 | IPR003591 | - | |
Rops9g01683 | 944 | Gene3D | Ribonuclease Inhibitor | 363 | 624 | IPR032675 | - | |
Rops9g01683 | 944 | FunFam | Probably inactive leucine-rich repeat receptor-like protein kinase | 664 | 775 | - | - | |
Rops9g01683 | 944 | SUPERFAMILY | L domain-like | 361 | 615 | - | - | |
Rops9g01683 | 944 | SMART | LRR_sd22_2 | 266 | 298 | - | - | |
Rops9g01683 | 944 | SMART | LRR_sd22_2 | 170 | 196 | - | - | |
Rops9g01683 | 944 | SMART | LRR_sd22_2 | 530 | 551 | - | - | |
Rops9g01683 | 944 | SMART | LRR_sd22_2 | 482 | 508 | - | - | |
Rops9g01683 | 944 | SMART | LRR_sd22_2 | 96 | 116 | - | - | |
Rops9g01683 | 944 | SUPERFAMILY | L domain-like | 31 | 357 | - | - | |
Rops9g01683 | 944 | FunFam | Leucine-rich receptor-like protein kinase family protein | 211 | 309 | - | - | |
Rops9g01683 | 944 | SMART | serkin_6 | 700 | 929 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops9g01683 | 944 | ProSiteProfiles | Protein kinase domain profile. | 700 | 944 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops9g01683 | 944 | Pfam | Leucine rich repeat | 244 | 303 | IPR001611 | GO:0005515 | |
Rops9g01683 | 944 | Pfam | Leucine rich repeat | 339 | 398 | IPR001611 | GO:0005515 | |
Rops9g01683 | 944 | Pfam | Leucine rich repeat | 147 | 207 | IPR001611 | GO:0005515 | |
Rops9g01683 | 944 | PANTHER | OS01G0750400 PROTEIN | 148 | 293 | - | - | |
Rops9g01683 | 944 | FunFam | Probably inactive leucine-rich repeat receptor-like protein kinase | 320 | 624 | - | - | |
Rops9g01683 | 944 | Gene3D | Transferase(Phosphotransferase) domain 1 | 777 | 846 | - | - | |
Rops9g01683 | 944 | Gene3D | Transferase(Phosphotransferase) domain 1 | 849 | 941 | - | - | |
Rops9g01683 | 944 | Gene3D | Ribonuclease Inhibitor | 29 | 144 | IPR032675 | - | |
Rops9g01683 | 944 | Gene3D | Ribonuclease Inhibitor | 145 | 238 | IPR032675 | - | |
Rops9g01683 | 944 | Pfam | Leucine Rich Repeat | 123 | 140 | IPR001611 | GO:0005515 | |
Rops9g01683 | 944 | Pfam | Leucine rich repeat N-terminal domain | 31 | 70 | IPR013210 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops9g01683 | Rops-Chr9 | 29474006 | 29477125 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops9g01683 | 32 | 927 | Receptor kinase-like Gene Family | AT2G25790 | 51.919 | 0.0 | 876 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_Singleton | Rops9g01683 | LRR_8 | 3.6e-08 | CL0022 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops9g01683 | - | - | gmx:100777118 | 1256.12 |