Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01683 ATGGCCAAAGGAACTCCAACGTTTCCAAAGTCCCTAACGTTTGTGTGCCTTGTCATGTTCATGTTCAACTTCCACTTATCACAAGGGGAAGAAGAACTTGATCTTCTGTTGTCTTTCAAATCTTCCATCCATGATGATCCACTTCACTTTCTCTCTAACTGGGTCAACTCCTCCGCCACTATTTGCAAGTGGCATGGCATCACATGTGACAACTCCTCCCATGTTAACAACATTGATCTTTCAGGTAAAAACATATCTGGCAATATTTCCTCATCCATATTTCAACTTTCAAATGTTACAACCATTGACCTCTCAAACAACCAGCTTGTTGGGGAAATAGTCCCAAACTCTCTTTCTGTCTCATTACTTCGTTACCTCAATCTTAGCAATAACAATCTCACAGGTTCATTGCCACAAATTCTGTTTTCCCTTTCTTTTCCTCACCTCGAAACTCTTGATCTCTCGAACAACATGTTTTCCGGGAAAATACCAGACCAAATTGGATTGCTATCAAATCTTGTATATCTTGATCTTGGGGGCAACTTTTTGGTGGGAAAAATTCCAAATTCCATCACCAACATGACTTGTTTGCAATACTTGACCTTGGCTTCAAACCAATTGGTGGGAGAAATACCACTAGAGATTGGCTTAATGAAGAGCTTGAAATGGATCTACTTTGGTTTCAATAACCTCTCTGGTGAGATACCAAGTGGCATTGGAGAATTATTTTCTTTAAATCACCTTGATCTTGTTTACAACAATCTCACTGGACAAATTCCTGAATCTCTTGGAAACCTCACTGAACTTCAGTATCTCTTTCTCTATCAAAACAACCTTATAGGTCCAATTCCTCGATCTATTTTCCGACTAAAAAAGCTTATCTCACTTGATCTCAGTGATAACTCGCTTTCAGGTGAGATTTCTGAGCTTGTGATTCAACTCCAGAGACTAGAGATACTTCATCTTTTCTCCAACAACTTCACAGGAAAGATTCCAAAAGCTTTAACCTCTTTGTCTCGGCTCCAAGTCCTTCAGCTTTGGTCAAACAAATTAACAGGTGAGATTCCAGAGCAACTTGGAAAGCACAACAACCTCACTGTATTGGACCTATCCACCAACAACCTTTCTGGGAAAATCCCAGATACTTTATGTGACTCTGGCAATCTTTACAAACTCATCCTCTTTTCAAACTCTTTCCAAGGAGAAATCCCAAAATGCTTAAGCTCTTGTAGAAGCATACGCCGAATGCGTCTCCAAAACAACAAGCTTTCAGGGGAACTACCAAAACAGTTAACCAAATTGCCTCATATTTACTTCTTGGATATCTCTGGCAATAAACTCTCTGGAAGGATCGATGACAGAAAATGGGACATGCCAGCACTTCAAATGTTTAGTTTGGCTCACAATAACTTCTCAGGGGAGTTACCAAACTTGTTCGGGGGGAGTGAAAAACTGGAGAATTTGGACTTATCAGATAATCAGTTTTCTGGTTATATTCAACCTAGTTTTGGGAACTTGTCAGAGGTCATGCAATTGAAGCTTAGCAATAACAAGCTTTTTGGTAACATCCCAGGAGAACTCTGTTTGTGCAAGAAGCTTGTGACTTTAGACCTCAGCCAGAACCAGCTCACAGGGAAAATTCCGATTATGCTTGCTGAGTTACCAGTTCTTGGACAATTGGATTTGTCAGTAAACCAATTTTCTGGAGAAATTCCAAAGAATTTAGCAAGTGTGGAATCTCTTGTTGAGGTAAACATATCCCATAACCATTTCCATGGAAGTTTACCTTCCACTGGTGCTTTCCTTGCCATAAAGGCAAGTGCAGTTACAGGAAACGAGCTTTGTGAAAGTGATAATCATCCTTCAAGTGGTTTGCCACCATGCAAAGGTGATCAAAACCCAACTTGGTGGTTTATTCTACTCTGTTTTCTAGTGGGGTTGGCAGCATTTGTTGTGGTTGCTTTTCTCATCGTTATTATCCGCAGAAGAAAGCATTTGGAACCAACAAGATTGGAGAAAGAAAATGGCACGTGGGAAATGCAACTTTTTGATCCGAAAGTCTCGAAATGGATCACCATCGATGATGTTTTGTCTTCAGCAAAAGAAGAAAATGTAATTTCCAGAGGAAGGAACTGGGTCTCGTATGAAGGGAAGTGCATTGCCAATGACATGAAGTTCATGGTGGATGAAATCAGTGACACAAATTCAGTTCCACTTAGCTATTGGGAGGACATGGTGGAGTTGGGTAAGGTTCAGCACCCAAACATAGTTAAGTTGATTGGAATATGTAGGTATGGTAAGGGAGGATACTTGGTGTATGAGCATTCAGAAGGAAAGAATTTGAGCCAAGTTTTGAGGAATATGAGTTGGGAACGGAGGCGAAAAATAGTCTTGGGGATTTCAAAAGCACTGAAATTCTTTCACTTTCATTGTTCGTCCAAGGTTTTGGTTGGGGAGTTAACACCACAGATGGTTCTGGTCGATGCCAAAGACGTGCCTCACCTGAGGCTGTGCCCGGAAGCCCGGGTTTTCATTTCCTCTGCCTATGTTGCCCCAGGTCCTGTGGACATAGAAGCTGACAAGTACGAGAGTGTCGTTGAGTGGGCCCGGTATTGCTACTCTGACTGCCATCTTGACACGTGGATCGACCCCACGATGAAGGGTGGATTTGCATCCACCAATCACAACGACGTCGTTGAGATGATGAACCTCGCCTTGCACTGCACTGCAACAGATCCCACAGCAAGGCCCTGCGCCACCCAAGTACTCAAAACCCTGGAAGCTGTCAACAACAACCACCGCGCACACACTTTTTCATGTGTTTCCTCTTTCTGA 2835 0.4212 MAKGTPTFPKSLTFVCLVMFMFNFHLSQGEEELDLLLSFKSSIHDDPLHFLSNWVNSSATICKWHGITCDNSSHVNNIDLSGKNISGNISSSIFQLSNVTTIDLSNNQLVGEIVPNSLSVSLLRYLNLSNNNLTGSLPQILFSLSFPHLETLDLSNNMFSGKIPDQIGLLSNLVYLDLGGNFLVGKIPNSITNMTCLQYLTLASNQLVGEIPLEIGLMKSLKWIYFGFNNLSGEIPSGIGELFSLNHLDLVYNNLTGQIPESLGNLTELQYLFLYQNNLIGPIPRSIFRLKKLISLDLSDNSLSGEISELVIQLQRLEILHLFSNNFTGKIPKALTSLSRLQVLQLWSNKLTGEIPEQLGKHNNLTVLDLSTNNLSGKIPDTLCDSGNLYKLILFSNSFQGEIPKCLSSCRSIRRMRLQNNKLSGELPKQLTKLPHIYFLDISGNKLSGRIDDRKWDMPALQMFSLAHNNFSGELPNLFGGSEKLENLDLSDNQFSGYIQPSFGNLSEVMQLKLSNNKLFGNIPGELCLCKKLVTLDLSQNQLTGKIPIMLAELPVLGQLDLSVNQFSGEIPKNLASVESLVEVNISHNHFHGSLPSTGAFLAIKASAVTGNELCESDNHPSSGLPPCKGDQNPTWWFILLCFLVGLAAFVVVAFLIVIIRRRKHLEPTRLEKENGTWEMQLFDPKVSKWITIDDVLSSAKEENVISRGRNWVSYEGKCIANDMKFMVDEISDTNSVPLSYWEDMVELGKVQHPNIVKLIGICRYGKGGYLVYEHSEGKNLSQVLRNMSWERRRKIVLGISKALKFFHFHCSSKVLVGELTPQMVLVDAKDVPHLRLCPEARVFISSAYVAPGPVDIEADKYESVVEWARYCYSDCHLDTWIDPTMKGGFASTNHNDVVEMMNLALHCTATDPTARPCATQVLKTLEAVNNNHRAHTFSCVSSF* 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01683 944 Gene3D Phosphorylase Kinase; domain 1 669 775 - -
Rops9g01683 944 ProSiteProfiles Leucine-rich repeat profile. 122 144 IPR001611 GO:0005515
Rops9g01683 944 FunFam Leucine-rich repeat receptor-like protein kinase 29 189 - -
Rops9g01683 944 ProSiteProfiles Leucine-rich repeat profile. 148 170 IPR001611 GO:0005515
Rops9g01683 944 SUPERFAMILY Protein kinase-like (PK-like) 703 931 IPR011009 -
Rops9g01683 944 Gene3D Ribonuclease Inhibitor 240 362 IPR032675 -
Rops9g01683 944 SMART LRR_typ_2 218 242 IPR003591 -
Rops9g01683 944 SMART LRR_typ_2 146 170 IPR003591 -
Rops9g01683 944 SMART LRR_typ_2 266 290 IPR003591 -
Rops9g01683 944 SMART LRR_typ_2 458 481 IPR003591 -
Rops9g01683 944 SMART LRR_typ_2 364 386 IPR003591 -
Rops9g01683 944 SMART LRR_typ_2 120 144 IPR003591 -
Rops9g01683 944 SMART LRR_typ_2 506 530 IPR003591 -
Rops9g01683 944 SMART LRR_typ_2 338 362 IPR003591 -
Rops9g01683 944 Gene3D Ribonuclease Inhibitor 363 624 IPR032675 -
Rops9g01683 944 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase 664 775 - -
Rops9g01683 944 SUPERFAMILY L domain-like 361 615 - -
Rops9g01683 944 SMART LRR_sd22_2 266 298 - -
Rops9g01683 944 SMART LRR_sd22_2 170 196 - -
Rops9g01683 944 SMART LRR_sd22_2 530 551 - -
Rops9g01683 944 SMART LRR_sd22_2 482 508 - -
Rops9g01683 944 SMART LRR_sd22_2 96 116 - -
Rops9g01683 944 SUPERFAMILY L domain-like 31 357 - -
Rops9g01683 944 FunFam Leucine-rich receptor-like protein kinase family protein 211 309 - -
Rops9g01683 944 SMART serkin_6 700 929 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01683 944 ProSiteProfiles Protein kinase domain profile. 700 944 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01683 944 Pfam Leucine rich repeat 244 303 IPR001611 GO:0005515
Rops9g01683 944 Pfam Leucine rich repeat 339 398 IPR001611 GO:0005515
Rops9g01683 944 Pfam Leucine rich repeat 147 207 IPR001611 GO:0005515
Rops9g01683 944 PANTHER OS01G0750400 PROTEIN 148 293 - -
Rops9g01683 944 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase 320 624 - -
Rops9g01683 944 Gene3D Transferase(Phosphotransferase) domain 1 777 846 - -
Rops9g01683 944 Gene3D Transferase(Phosphotransferase) domain 1 849 941 - -
Rops9g01683 944 Gene3D Ribonuclease Inhibitor 29 144 IPR032675 -
Rops9g01683 944 Gene3D Ribonuclease Inhibitor 145 238 IPR032675 -
Rops9g01683 944 Pfam Leucine Rich Repeat 123 140 IPR001611 GO:0005515
Rops9g01683 944 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01683 Rops-Chr9 29474006 29477125 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01683 32 927 Receptor kinase-like Gene Family AT2G25790 51.919 0.0 876
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Singleton Rops9g01683 LRR_8 3.6e-08 CL0022
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01683 - - gmx:100777118 1256.12